RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PNMA2Q9UL42 364 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
UBE3D-201ENST00000237186 H3BQF6 201 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 BUB1O43683 1085 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 LYPLA2O95372 231 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 P4HBP07237 508 aaKnown RBP17.69■□□□□ 0.42
UBE3D-201ENST00000237186 MAPK7Q13164 816 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 PPP2R5AQ15172 486 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 KIAA0753Q2KHM9 967 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 TCERG1LQ5VWI1 586 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 PCNX4Q63HM2 1172 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.69■□□□□ 0.42
UBE3D-201ENST00000237186 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 ZCCHC17Q9NP64 241 aaKnown RBP17.69■□□□□ 0.42
UBE3D-201ENST00000237186 AGPAT3Q9NRZ7 376 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 DBR1Q9UK59 544 aaKnown RBP17.69■□□□□ 0.42
UBE3D-201ENST00000237186 DAAM1Q9Y4D1 1078 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 ARHGEF35A5YM69 484 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 POLR3GO15318 223 aaPredicted RBP17.69■□□□□ 0.42
UBE3D-201ENST00000237186 CYP2C19P33261 490 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 ARID5AQ03989 594 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 TNFAIP1Q13829 316 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 ODR4Q5SWX8 454 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 DAW1Q8N136 415 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 GCNT4Q9P109 453 aa17.69■□□□□ 0.42
UBE3D-201ENST00000237186 NFIBO00712 420 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 PALMO75781 387 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 GFPT2O94808 682 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 C2orf54Q08AI8 447 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 TNIP1Q15025 636 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 MEI1Q5TIA1 1274 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 MIER3Q7Z3K6 550 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 HOOK2Q96ED9 719 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 ZFP91Q96JP5 570 aaPredicted RBP17.68■□□□□ 0.42
UBE3D-201ENST00000237186 ACBD3Q9H3P7 528 aa17.68■□□□□ 0.42
UBE3D-201ENST00000237186 AGO4Q9HCK5 861 aaKnown RBP17.68■□□□□ 0.42
UBE3D-201ENST00000237186 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.68■□□□□ 0.42
UBE3D-201ENST00000237186 LRRIQ3A6PVS8 624 aaPredicted RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 CTNND1O60716 968 aaKnown RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 FMO5P49326 533 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 ALCAMQ13740 583 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 TKFCQ3LXA3 575 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 CFAP221Q4G0U5 840 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 SYTL5Q8TDW5 730 aaPredicted RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 PACSIN1Q9BY11 444 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 TAOK3Q9H2K8 898 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 TBC1D22BQ9NU19 505 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 PSD3Q9NYI0 1048 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 NAGPAQ9UK23 515 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 INTUQ9ULD6 942 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 CES2O00748 559 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 NCK2O43639 380 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 HIP1RO75146 1068 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 FLOT1O75955 427 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 FDX1P10109 184 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 FERP16591 822 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 NAP1L1P55209 391 aaKnown RBP17.67■□□□□ 0.42
UBE3D-201ENST00000237186 CCDC181Q5TID7 509 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 PADI6Q6TGC4 694 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 JDP2Q8WYK2 163 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 STK33Q9BYT3 514 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 MED4Q9NPJ6 270 aa17.67■□□□□ 0.42
UBE3D-201ENST00000237186 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 MRPS9P82933 396 aaKnown RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 ITGB3BPQ13352 177 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 COG2Q14746 738 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 IFI16Q16666 785 aaKnown RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 ALKBH5Q6P6C2 394 aaKnown RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 FMNL3Q8IVF7 1028 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 IL31RAQ8NI17 732 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 IKZF4Q9H2S9 585 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
UBE3D-201ENST00000237186 CD2APQ9Y5K6 639 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 ZHX2Q9Y6X8 837 aa17.66■□□□□ 0.42
UBE3D-201ENST00000237186 A0A0A6YYK5 440 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 TNFRSF8P28908 595 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 CXCR5P32302 372 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 STAT1P42224 750 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 VPS36Q86VN1 386 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 C12orf56Q8IXR9 622 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 EXOC4Q96A65 974 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 LRRC1Q9BTT6 524 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 TMEM206Q9H813 350 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 AJAP1Q9UKB5 411 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 PPP1R9AQ9ULJ8 1098 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 RBBP6Q7Z6E9 1792 aaKnown RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 NFKBIEO00221 500 aa17.65■□□□□ 0.42
UBE3D-201ENST00000237186 QARSP47897 775 aaKnown RBP17.65■□□□□ 0.42
UBE3D-201ENST00000237186 MCCD1P59942 119 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms