RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
CPS1-201ENST00000233072 PCIF1Q9H4Z3 704 aa7.73□□□□□ -1.17
CPS1-201ENST00000233072 SCOCQ9UIL1 159 aa7.73□□□□□ -1.17
CPS1-201ENST00000233072 ATP8A1Q9Y2Q0 1164 aa7.73□□□□□ -1.17
CPS1-201ENST00000233072 USP17L5A8MUK1 530 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 CLIC2O15247 247 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 DDIT3P35638 169 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 MTMR1Q13613 665 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 NECTIN1Q15223 517 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ADAT2Q7Z6V5 191 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 PARD3BQ8TEW8 1205 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TSSK1BQ9BXA7 367 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 HPCAL4Q9UM19 191 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 UTYO14607 1347 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SPECC1L-ADORA2AF8WAN1 911 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 K7ERI5 159 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 NR1D1P20393 614 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PMLP29590 882 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 CRKP46108 304 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SNX1Q13596 522 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 RCN2Q14257 317 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 KRT31Q15323 416 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 LRRC41Q15345 812 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 GPIHBP1Q8IV16 184 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 MICAL1Q8TDZ2 1067 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 OSBP2Q969R2 916 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 WNT8AQ9H1J5 351 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZNF302Q9NR11 478 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 KDM6AO15550 1401 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 HOXD10P28358 340 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 LRRC31Q6UY01 552 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PDCD7Q8N8D1 485 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 COA7Q96BR5 231 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZSWIM5Q9P217 1185 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SUN2Q9UH99 717 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 STAP1Q9ULZ2 295 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PYCARDQ9ULZ3 195 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 MADDQ8WXG6 1647 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 KDM6BO15054 1643 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SNX2O60749 519 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SMARCA1P28370 1054 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SLC16A2P36021 539 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ARHGDIAP52565 204 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 YWHAHQ04917 246 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 LAMB3Q13751 1172 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 RNF219Q5W0B1 726 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 C2orf69Q8N8R5 385 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 CALN1Q9BXU9 219 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 DBNDD1Q9H9R9 158 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TUFT1Q9NNX1 390 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SPTLC3Q9NUV7 552 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TEKT2Q9UIF3 430 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 DLC1Q96QB1 1528 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 LRRN2O75325 713 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 HSPA4LO95757 839 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 NR3C1P04150 777 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PYGLP06737 847 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 KRT7P08729 469 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SNRPFP62306 86 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 MDM2Q00987 491 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 RASGRF1Q13972 1273 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TTLL4Q14679 1199 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 UBE2SQ16763 222 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZNF699Q32M78 642 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SLFNL1Q499Z3 407 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPS1-201ENST00000233072 LRRC23Q53EV4 343 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 NAA35Q5VZE5 725 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 PDXDC1Q6P996 788 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ST13P4Q8IZP2 240 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 XXYLT1Q8NBI6 393 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 RASGRP4Q8TDF6 673 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 NSUN6Q8TEA1 469 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 IFT43Q96FT9 208 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZNF560Q96MR9 790 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 GDAP1L1Q96MZ0 367 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 SEC31BQ9NQW1 1179 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZC4H2Q9NQZ6 224 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 SUCLA2Q9P2R7 463 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 NARFQ9UHQ1 456 aa7.72□□□□□ -1.17
CPS1-201ENST00000233072 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
CPS1-201ENST00000233072 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.17
CPS1-201ENST00000233072 CLTAP09496 248 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 MCF2P10911 925 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 CHRNA3P32297 505 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 CCT5P48643 541 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 MAPRE2Q15555 327 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 SPICE1Q8N0Z3 855 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 DACT3Q96B18 629 aaPredicted RBP7.71□□□□□ -1.17
CPS1-201ENST00000233072 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 STRBPQ96SI9 672 aaKnown RBP7.71□□□□□ -1.17
CPS1-201ENST00000233072 PPCSQ9HAB8 311 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 PIM2Q9P1W9 311 aa7.71□□□□□ -1.17
CPS1-201ENST00000233072 DNAJC12Q9UKB3 198 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms