RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 RIOX1Q9H6W3 641 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 EP400Q96L91 3159 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 GLG1Q92896 1179 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 OSBPL1AQ9BXW6 950 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 UBA5Q9GZZ9 404 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 ZMYND8Q9ULU4 1186 aaPredicted RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.044e-18■■□□□ 13.9
SF1-201ENST00000227503 RHBDL3P58872 404 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 SLC18A3Q16572 532 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 UNC13DQ70J99 1090 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 PIGWQ7Z7B1 504 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 CCDC84Q86UT8 332 aaPredicted RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 EPS8L3Q8TE67 593 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 TLCD1Q96CP7 247 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 INTS9Q9NV88 658 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 FGFR1OP2Q9NVK5 253 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 CPSF2Q9P2I0 782 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 ATP6V0A2Q9Y487 856 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 SSU72P8A0A1W2PR75 194 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 SPDYE3A6NKU9 549 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 SNUPNO95149 360 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 SERPING1P05155 500 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 CRELD2Q6UXH1 353 aaPredicted RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 KLHL29Q96CT2 875 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 FGFBP2Q9BYJ0 223 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 CD209Q9NNX6 404 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
SF1-201ENST00000227503 DBR1Q9UK59 544 aaKnown RBP15.3■□□□□ 0.04
SF1-201ENST00000227503 AFF2P51816 1311 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 SLC37A4O43826 429 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 CREB1P16220 341 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 GPSM2P81274 684 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 ZNF268Q14587 947 aaPredicted RBP15.29■□□□□ 0.04
SF1-201ENST00000227503 TAF11Q15544 211 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 CALCRLQ16602 461 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 NELFCDQ8IXH7 590 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 EPB41L4BQ9H329 900 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 IRAK4Q9NWZ3 460 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 NKX1-2Q9UD57 310 aaPredicted RBP15.29■□□□□ 0.04
SF1-201ENST00000227503 DPPA5A6NC42 116 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 PLTPP55058 493 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 PTK2Q05397 1052 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
SF1-201ENST00000227503 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
SF1-201ENST00000227503 FMO2Q99518 471 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 ADAM22Q9P0K1 906 aa15.29■□□□□ 0.04
SF1-201ENST00000227503 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 TDP2O95551 362 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
SF1-201ENST00000227503 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
SF1-201ENST00000227503 GUF1Q8N442 669 aaKnown RBP15.28■□□□□ 0.04
SF1-201ENST00000227503 ATP8B4Q8TF62 1192 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 P3H4Q92791 437 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
SF1-201ENST00000227503 SNX24Q9Y343 169 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 TRAF5O00463 557 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 ZNF211Q13398 564 aaPredicted RBP15.28■□□□□ 0.04
SF1-201ENST00000227503 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 GJA10Q969M2 543 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■■□□ 15.6
SF1-201ENST00000227503 ABCB11O95342 1321 aa15.28■□□□□ 0.04
SF1-201ENST00000227503 A0A1B0GVG6 124 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 hCG_1984214I3L0E3 225 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 GNAT1P11488 350 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 IL1R1P14778 569 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 FGFR4P22455 802 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 RAB27AP51159 221 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 USP11P51784 963 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 SLC29A2Q14542 456 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 AADACL2Q6P093 401 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 ZNF713Q8N859 430 aaPredicted RBP15.27■□□□□ 0.04
SF1-201ENST00000227503 RAD54LQ92698 747 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 COA7Q96BR5 231 aa15.27■□□□□ 0.04
SF1-201ENST00000227503 FAM163AQ96GL9 167 aaPredicted RBP15.27■□□□□ 0.04
SF1-201ENST00000227503 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
SF1-201ENST00000227503 POTEMA6NI47 508 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 FGGP02679 453 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 ATP4AP20648 1035 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 RIPK1Q13546 671 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 BLMHQ13867 455 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 PDIA5Q14554 519 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.03
SF1-201ENST00000227503 KCNK18Q7Z418 384 aa15.27■□□□□ 0.03
SF1-201ENST00000227503 ERVK-5Q9HDB9 667 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms