RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ATP1A3P13637 1013 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 PRCPP42785 496 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TWF2Q6IBS0 349 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 RNF149Q8NC42 400 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 IQCGQ9H095 443 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 POLR3FQ9H1D9 316 aaPredicted RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TUFT1Q9NNX1 390 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 BUB1BO60566 1050 aaPredicted RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 USP2O75604 605 aaPredicted RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 RARBP10826 455 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 MAGEA1P43355 309 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 ERVK-9P63128 1117 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 ERVK-24P63145 666 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TNFAIP2Q03169 654 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
CCDC113-201ENST00000219299 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 TSC1Q92574 1164 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 NOX5Q96PH1 765 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
CCDC113-201ENST00000219299 HIP1RO75146 1068 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 PRKCEQ02156 737 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 RWDD2AQ9UIY3 292 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 LTBP3Q9NS15 1303 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 NPHP3-ACAD11A0A0J9YXS1 232 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 IKBKBO14920 756 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 N4BP1O75113 896 aaKnown RBP10.21□□□□□ -0.77
CCDC113-201ENST00000219299 EEF1GP26641 437 aaKnown RBP10.21□□□□□ -0.77
CCDC113-201ENST00000219299 RPA1P27694 616 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 PHKA2P46019 1235 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 GPRASP2Q96D09 838 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
CCDC113-201ENST00000219299 LRFN2Q9ULH4 789 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 CRYBG1Q9Y4K1 1723 aa10.21□□□□□ -0.77
CCDC113-201ENST00000219299 DGAT1O75907 488 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 FGRP09769 529 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 KCNA3P22001 575 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 PSMC4P43686 418 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 ACTR2P61160 394 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 DNAJC18Q9H819 358 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 PXMP2Q9NR77 195 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 C4BP0C0L5 1744 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 TLDC2A0PJX2 215 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 ZNF233A6NK53 670 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 CSPG5O95196 566 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 FKBP1BP68106 108 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 LRRC63Q05C16 580 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 SEPT6Q14141 434 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 HAUS6Q7Z4H7 955 aa10.21□□□□□ -0.78
CCDC113-201ENST00000219299 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 STRNO43815 780 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ADORA2AP29274 412 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 NMT1P30419 496 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ALDH3A1P30838 453 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 PCK1P35558 622 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 MXI1P50539 228 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ALCAMQ13740 583 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 MAN2A1Q16706 1144 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 METTL16Q86W50 562 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TMTC1Q8IUR5 882 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 GMLQ99445 158 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 MAP3K20Q9NYL2 800 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SYNPO2Q9UMS6 1093 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 XPOTO43592 962 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 PIK3CAP42336 1068 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 INHBEP58166 350 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 INTS8Q75QN2 995 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CATSPER3Q86XQ3 398 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SPDYE5A6NIY4 337 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TCF7P36402 384 aaPredicted RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 MYL7Q01449 175 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 NOGQ13253 232 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 LAMC2Q13753 1193 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 C8orf74Q6P047 294 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CACNA2D3Q8IZS8 1091 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 NT5C1BQ96P26 610 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 FAM184BQ9ULE4 1060 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 PKD1L3Q7Z443 1732 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CTSHP09668 335 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 TMEM62Q0P6H9 643 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 PTPAQ15257 358 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SLFN12LQ6IEE8 588 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 RUFY4Q6ZNE9 571 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CLEC17AQ6ZS10 378 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SPATS2Q86XZ4 545 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 IFT20Q8IY31 132 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CCDC26Q8TAB7 109 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 UBLCP1Q8WVY7 318 aaPredicted RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 SREK1Q8WXA9 508 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ZBTB9Q96C00 473 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 CABS1Q96KC9 395 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 RPF1Q9H9Y2 349 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 ERAP1Q9NZ08 941 aa10.2□□□□□ -0.78
CCDC113-201ENST00000219299 PABPN1LA6NDY0 278 aaKnown RBP10.2□□□□□ -0.78
CCDC113-201ENST00000219299 AFPP02771 609 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms