RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 PSMD2Q13200 908 aa18.38■□□□□ 0.53
POLR2E-201ENST00000215587 DPCR1Q3MIW9 517 aa18.38■□□□□ 0.53
POLR2E-201ENST00000215587 ZNF658Q5TYW1 1059 aaPredicted RBP18.38■□□□□ 0.53
POLR2E-201ENST00000215587 MLKLQ8NB16 471 aa18.38■□□□□ 0.53
POLR2E-201ENST00000215587 SLC7A3Q8WY07 619 aa18.38■□□□□ 0.53
POLR2E-201ENST00000215587 DRC1Q96MC2 740 aa18.38■□□□□ 0.53
POLR2E-201ENST00000215587 TUT1Q9H6E5 874 aaKnown RBP18.38■□□□□ 0.53
POLR2E-201ENST00000215587 MYH9P35579 1960 aaKnown RBP18.37■□□□□ 0.53
POLR2E-201ENST00000215587 CENPFP49454 3210 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 TRIOBPQ9H2D6 2365 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 FRMD3A2A2Y4 597 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 PGK1P00558 417 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 NKX3-2P78367 333 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 TBC1D8BQ0IIM8 1120 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
POLR2E-201ENST00000215587 ZNF484Q5JVG2 852 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 FAM26FQ5R3K3 315 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 KATNAL1Q9BW62 490 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 DNAJC25Q9H1X3 360 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 PARVGQ9HBI0 331 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 SEL1LQ9UBV2 794 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 COL1A2P08123 1366 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 WDR81Q562E7 1941 aa18.37■□□□□ 0.53
POLR2E-201ENST00000215587 KIAA0100Q14667 2235 aaKnown RBP18.37■□□□□ 0.53
POLR2E-201ENST00000215587 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 F2P00734 622 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 RSPH10BP0C881 870 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 PPP1R2P41236 205 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 STIM1Q13586 685 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 EMC2Q15006 297 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 TARBP2Q15633 366 aaKnown RBP18.36■□□□□ 0.53
POLR2E-201ENST00000215587 FAM102BQ5T8I3 360 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 C11orf57Q6ZUT1 292 aaPredicted RBP18.36■□□□□ 0.53
POLR2E-201ENST00000215587 MAEAQ7L5Y9 396 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 KIFAP3Q92845 792 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 JPH2Q9BR39 696 aaPredicted RBP18.36■□□□□ 0.53
POLR2E-201ENST00000215587 RNPEPQ9H4A4 650 aa18.36■□□□□ 0.53
POLR2E-201ENST00000215587 ARID2Q68CP9 1835 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 SZT2Q5T011 3432 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 MYADML2A6NDP7 307 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 GAS2O43903 313 aaKnown RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 ADAMTS4O75173 837 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 BMP6P22004 513 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 CST5P28325 142 aaPredicted RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 PSEN2P49810 448 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 ZNF131P52739 623 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 IRX5P78411 483 aaPredicted RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 EHHADHQ08426 723 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 MAPK7Q13164 816 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 MFSD10Q14728 455 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 MTG1Q9BT17 334 aaPredicted RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 LARSQ9P2J5 1176 aaKnown RBP18.35■□□□□ 0.53
POLR2E-201ENST00000215587 GDAQ9Y2T3 454 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 CUL9Q8IWT3 2517 aa18.35■□□□□ 0.53
POLR2E-201ENST00000215587 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 INSRRP14616 1297 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 ZNF165P49910 485 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 PPFIA1Q13136 1202 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 GSE1Q14687 1217 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 CT47A1Q5JQC4 288 aaPredicted RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 RNF180Q86T96 592 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 GAS2L3Q86XJ1 694 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 SMYD4Q8IYR2 804 aaPredicted RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 PCSK9Q8NBP7 692 aaKnown RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 CEP89Q96ST8 783 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■□□ 18.6
POLR2E-201ENST00000215587 SLC39A2Q9NP94 309 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 OLFML3Q9NRN5 406 aa18.34■□□□□ 0.53
POLR2E-201ENST00000215587 COLQQ9Y215 455 aaPredicted RBP18.34■□□□□ 0.53
POLR2E-201ENST00000215587 RRN3P2A6NIE6 340 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 SFI1A8K8P3 1242 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 MAFO75444 373 aaPredicted RBP18.33■□□□□ 0.52
POLR2E-201ENST00000215587 KIF20AO95235 890 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 PLS3P13797 630 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 IGBP1P78318 339 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 KIAA0753Q2KHM9 967 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 STXBP4Q6ZWJ1 553 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 DAW1Q8N136 415 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 RETREG2Q8NC44 543 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 KAT2BQ92831 832 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 HPS3Q969F9 1004 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
POLR2E-201ENST00000215587 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.52
POLR2E-201ENST00000215587 POLD4Q9HCU8 107 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 GPRC5CQ9NQ84 441 aa18.33■□□□□ 0.52
POLR2E-201ENST00000215587 TBC1D7Q9P0N9 293 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms