RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 CalcbQ99MP3 130 aa16.62■□□□□ 0.25
Upf1-202ENSMUST00000215817 Igf2bp3Q9CPN8 579 aaKnown RBP16.62■□□□□ 0.25
Upf1-202ENSMUST00000215817 Cep72Q9D3R3 646 aa16.62■□□□□ 0.25
Upf1-202ENSMUST00000215817 Map3k20Q9ESL4 802 aaKnown RBP16.62■□□□□ 0.25
Upf1-202ENSMUST00000215817 Brpf3B2KF05 1204 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Pdzrn4E9PUZ9 1014 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Cpsf2O35218 782 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Mdm4O35618 489 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Serpina1aP07758 413 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Serpina1bP22599 413 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Bcat1P24288 386 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Xrcc5P27641 732 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 PrkcbP68404 671 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Serpina1cQ00896 412 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Serpina1dQ00897 413 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Spata32Q8C5V0 334 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 SfpqQ8VIJ6 699 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tmem192Q9CXT7 266 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Zcchc17Q9ESX4 241 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Prpmp5E9PXN1 296 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tagap1P0CAX8 505 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Fgfr1opQ66JX5 399 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Onecut3Q8K557 490 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ctage5Q8R311 779 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Cox16Q9CR63 106 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tmem79Q9D709 391 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Git2Q9JLQ2 708 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ddx25Q9QY15 484 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Marf1Q8BJ34 1730 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Sema4dO09126 861 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Sema3fO88632 785 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Lamp1P11438 406 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Glud1P26443 558 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Dact3Q0PHV7 610 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 UrgcpQ5NCI0 926 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Lrrc15Q80X72 579 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tmem134Q8R0J4 195 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Vmn1r213Q8R278 384 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Fam76aQ922G2 307 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Castor1Q9CWQ8 331 aa16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Atp13a1Q9EPE9 1200 aaKnown RBP16.61■□□□□ 0.25
Upf1-202ENSMUST00000215817 Gm3409A0A0G2JE67 319 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Gm4297D3YWB7 211 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Apol11aE9PZG0 334 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Gm3095E9Q058 166 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 YwhaeP62259 255 aaKnown RBP16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Mansc4Q3UU94 337 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Pcsk7Q61139 770 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Slc38a7Q8BWH0 463 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 MafaQ8CF90 359 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ago2Q8CJG0 860 aaKnown RBP16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Thap12Q9CUX1 758 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Cfap57Q9D180 1249 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Klrc1Q9Z202 244 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Gfpt2Q9Z2Z9 682 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Trappc11B2RXC1 1133 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Mroh9G5E8L9 891 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Map1sQ8C052 973 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Rapgef5Q8C0Q9 814 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ddah1Q9CWS0 285 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Scrn1Q9CZC8 414 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Erp44Q9D1Q6 406 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Eef1gQ9D8N0 437 aaKnown RBP16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Casp14O89094 257 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ccdc186Q8C9S4 917 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tmem63cQ8CBX0 802 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Golga5Q9QYE6 729 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Col3a1P08121 1464 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Arhgef26D3YYY8 869 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Mov10P23249 1004 aaKnown RBP16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Nek1P51954 1203 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ptger2Q62053 362 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Armcx2Q6A058 784 aaKnown RBP16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Dusp4Q8BFV3 398 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Fam20aQ8CID3 541 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ube2sQ921J4 223 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 GhdcQ99J23 532 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 SerhlQ9EPB5 311 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ercc4Q9QZD4 917 aa16.6■□□□□ 0.25
Upf1-202ENSMUST00000215817 Col5a2Q3U962 1497 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Myl1P05977 188 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Adssl1P28650 457 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Sox5P35710 763 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Znf827Q505G8 1078 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Prmt6Q6NZB1 378 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 TxlnaQ6PAM1 554 aaKnown RBP16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Haus1Q8BHX1 278 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 RalylQ8BTF8 293 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Tbc1d22aQ8R5A6 516 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Krt20Q9D312 431 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Itgb5O70309 798 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Ccr1P51675 355 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Zscan2Q07230 614 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 NostrinQ6WKZ7 506 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Klhl11Q8CE33 709 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Znhit2Q9QY66 399 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Herc3A6H6S0 1050 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Pla2g4bP0C871 782 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Phka1P18826 1241 aa16.59■□□□□ 0.25
Upf1-202ENSMUST00000215817 Cyp11b1Q3TG86 501 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms