RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 C1qtnf12Q8R2Z0 308 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Atp6v1b1Q91YH6 513 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Serpinb12Q9D7P9 423 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Prl2c5Q9JLV9 222 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Sh2d3cQ9QZS8 854 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Plod1Q9R0E2 728 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 NhsB1AV60 1647 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Akap12Q9WTQ5 1684 aa13.27□□□□□ -0.28
Pcdh1-202ENSMUST00000159405 Zbtb7aO88939 569 aaKnown RBP13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Prl3d1P18121 224 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Slc9a1Q61165 820 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Sin3bQ62141 1098 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Krt9Q6RHW0 743 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 PhkbQ7TSH2 1085 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Zswim5Q80TC6 1188 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ccdc134Q8C7V8 229 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gtf2h1Q9DBA9 547 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Sept6Q9R1T4 434 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Lmtk3Q5XJV6 1424 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gm14525B1AZA0 212 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gm2012B1B0R1 212 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gm2030D3Z7C4 212 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Nfil3O08750 462 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Tbc1d10aP58802 500 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Lrrc55Q3UY51 311 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Actn1Q7TPR4 892 aaKnown RBP13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Pus7lQ8CE46 702 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Otud7aQ8R554 926 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Pcdhb4Q91XZ6 784 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Wbp11Q923D5 641 aaKnown RBP13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Tomm20lQ9D4V6 152 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Sgf29Q9DA08 293 aaKnown RBP13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Slc12a7Q9WVL3 1083 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ift172Q6VH22 1749 aa13.27□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Adamts7Q68SA9 1657 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Hnrnph3D3Z3N4 346 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Q14AM7 275 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Mtus1Q5HZI1 1210 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Glg1Q61543 1175 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ankrd13aQ80UP5 588 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Chn2Q80XD1 332 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Heatr3Q8BQM4 679 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Efl1Q8C0D5 1127 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Krt24A1L317 512 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ccdc144bE9PVZ3 520 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 IvlP48997 467 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Wdhd1P59328 1117 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Dpcr1Q3TNW5 500 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Cand2Q6ZQ73 1235 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Commd10Q8JZY2 202 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Dennd1aQ8K382 1016 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Pdxdc1Q99K01 787 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ppil4Q9CXG3 492 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 AacsQ9D2R0 672 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Cmtr1Q9DBC3 837 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 March8Q9DBD2 286 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gtf2ird1Q9JI57 1104 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Shank2Q80Z38 1476 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 1700016G14RikA0A286YCZ6 238 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Izumo3A6PWV3 263 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Trappc10Q3TLI0 1259 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ncoa4Q5U4H9 625 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Krt15Q61414 452 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Myh10Q61879 1976 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Znf513Q6PD29 541 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Smndc1Q8BGT7 238 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Cog5Q8C0L8 829 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Erich5Q8K0S2 362 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Nmd3Q99L48 503 aaKnown RBP13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Txndc9Q9CQ79 226 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ube3bQ9ES34 1070 aa13.26□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Lonrf2B2RT44 518 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Nmt2O70311 529 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Myl1P05977 188 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ints8Q80V86 995 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Dclre1bQ8C7W7 541 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ccdc15Q8C9M2 810 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Cacnb1Q8R3Z5 597 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 GatbQ99JT1 557 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Q9DA42 136 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gpaa1Q9WTK3 621 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Pck1Q9Z2V4 622 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Chrna9G3X8Z7 479 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 PrlP06879 226 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Jdp2P97875 163 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gsdmc4Q3TR54 480 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Mphosph8Q3TYA6 858 aaKnown RBP13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Nat14Q8BVG8 206 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Uba5Q8VE47 403 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Snrnp35Q9D384 244 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Krt27Q9Z320 448 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Tekt5G5E8A8 557 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gna14P30677 355 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Usp46P62069 366 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Map3k12Q60700 888 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Map2k2Q63932 401 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Inpp4bQ6P1Y8 924 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Gm5622Q810Q0 167 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 Ciao1Q99KN2 339 aa13.25□□□□□ -0.29
Pcdh1-202ENSMUST00000159405 StambpQ9CQ26 424 aa13.25□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms