RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Ccdc159Q8C963 411 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Pramef12Q9D2F1 463 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Sucla2Q9Z2I9 463 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Q3KNL4 93 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Ctdnep1Q3TP92 244 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Cgref1Q8R1U2 281 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Drap1Q9D6N5 205 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 IydQ9DCX8 285 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Cpsf3Q9QXK7 684 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Rnf17Q99MV7 1640 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Herc3A6H6S0 1050 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Ttc17E9PVB5 1198 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 ThrspQ62264 150 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Adat2Q6P6J0 191 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Ccdc154Q6RUT8 657 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Cd248Q91V98 765 aa16.6■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 1700016G14RikA0A286YCZ6 238 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Spag6Q3V0U9 509 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Satb1Q60611 764 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Scnn1aQ61180 699 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Kcnf1Q7TSH7 493 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Morc2bQ8C5W4 1022 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Gstt4Q9D4P7 240 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Spata17Q9D552 379 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Rnf14Q9JI90 485 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Trim38Q5SZ99 471 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Kiaa1841Q68FF0 718 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Brd2Q7JJ13 798 aaKnown RBP16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Heatr3Q8BQM4 679 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Zc3h6Q8BYK8 1177 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Pde10aQ8CA95 790 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Fgfr1op2Q9CRA9 253 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Setd6Q9CWY3 473 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Thumpd2Q9CZB3 528 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Gm28360A0A087WR25 190 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Lrrc23O35125 340 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Nde1Q9CZA6 344 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Tmem206Q9D771 350 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 IkbipQ9DBZ1 373 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Znf608Q56A10 1511 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Pja1O55176 578 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Wdr36Q3TAQ9 899 aaKnown RBP16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Snx19Q6P4T1 997 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Uba6Q8C7R4 1053 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Calhm6Q8C9E8 313 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Ccdc92Q8VDN4 314 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Fkbp6Q91XW8 327 aa16.59■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Gm8994E9PV04 411 aaKnown RBP16.58■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Nt5c2Q3V1L4 560 aa16.58■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Trim32Q8CH72 655 aa16.58■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 PdhbQ9D051 359 aa16.58■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Large1Q9Z1M7 756 aa16.58■□□□□ 0.25
Pcdha9-201ENSMUST00000115659 Vsnl1P62761 191 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Otop3Q80UF9 577 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rhot1Q8BG51 631 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Pspc1Q8R326 523 aaKnown RBP16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ttc4Q8R3H9 386 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tbc1d19Q8VDV7 526 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Rfc4Q99J62 364 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Stag2O35638 1231 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 GpiP06745 558 aaKnown RBP16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Zfp956Q3UZY6 572 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Sh3tc2Q80VA5 1289 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Eno4Q8C042 619 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tc2nQ91XT6 489 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Arhgef7Q9ES28 862 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Vps33bP59016 617 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 4932411N23RikQ8C0S0 470 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Anxa9Q9JHQ0 345 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Pdcd7Q9WTY1 482 aa16.58■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 C87977A2A958 498 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 A630010A05RikA9C473 232 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Abcb1bP06795 1276 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 PhkbQ7TSH2 1085 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Bag5Q8CI32 447 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Scrn2Q8VCA8 425 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Twf2Q9Z0P5 349 aaKnown RBP16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 DgkkE9Q7N4 1118 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Krt31Q61765 416 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ino80dQ66JY2 873 aaKnown RBP16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Mysm1Q69Z66 819 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ckap2lQ7TS74 745 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Q8C6G1 249 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gnl3Q8CI11 538 aaKnown RBP16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Tasp1Q8R1G1 420 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ndufb9Q9CQJ8 179 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Slc40a1Q9JHI9 570 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm45261A0A1B0GSP6 197 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ifnl2Q4VK74 193 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Vmn1r209Q5NC97 312 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Lig4Q8BTF7 911 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Olfr390Q8VEZ7 311 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Wdr46Q9Z0H1 622 aaKnown RBP16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Veph1A1A535 833 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Gm1758F6VZZ1 202 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Ap1g2O88512 791 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 RaraP11416 462 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Upf3bQ3ULL6 472 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Afap1l2Q5DTU0 825 aa16.57■□□□□ 0.24
Pcdha9-201ENSMUST00000115659 Adcy2Q80TL1 1090 aa16.57■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms