RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 BC051142Q3V0M8 400 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Klra3Q64329 266 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Depdc1aQ8CIG0 804 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Fermt3Q8K1B8 665 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc18a1Q8R090 521 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Trex1Q91XB0 314 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mettl13Q91YR5 698 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Txnrd3Q99MD6 652 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 NkapQ9D0F4 415 aaKnown RBP8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Coro7Q9D2V7 922 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc12a7Q9WVL3 1083 aa8.13□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Peak1Q69Z38 1735 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Xirp1O70373 1129 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tph1P17532 447 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tatdn3Q3U1C6 294 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tigd5Q499M4 642 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 HrQ61645 1182 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gja3Q64448 417 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 SpidrQ8BGX7 933 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 AsphQ8BSY0 741 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Dennd2aQ8C4S8 1000 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Wdr60Q8C761 999 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Zfp446Q8C9M8 523 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 CpzQ8R4V4 654 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ubxn6Q99PL6 442 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Sdr42e1Q9D665 394 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Stat2Q9WVL2 923 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Duox1A2AQ92 1551 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Folh1O35409 752 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Mucl2P02815 138 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Krt8P11679 490 aaKnown RBP8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Vcam1P29533 739 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 GclcP97494 637 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cep126Q0VBV7 1103 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Klhdc9Q3USL1 350 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Nell2Q61220 819 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ttc7aQ8BGB2 858 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 C130026I21RikQ8C898 291 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Lpin2Q99PI5 893 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Psma8Q9CWH6 250 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 KynuQ9CXF0 464 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Prpf4Q9DAW6 521 aaKnown RBP8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Klc4Q9DBS5 619 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Fmnl1Q9JL26 1094 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Il27raO70394 623 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Xrcc5P27641 732 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ccdc84Q4VA36 332 aaKnown RBP8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 TbataQ7TSD4 393 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Llgl1Q80Y17 1036 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Rassf10Q8BL43 508 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Iws1Q8C1D8 766 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ppm1fQ8CGA0 452 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc26a6Q8CIW6 758 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 MypopQ8R4U1 393 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ube2sQ921J4 223 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cmtm5Q9D6G9 156 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 MesdQ9ERE7 224 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tfr2Q9JKX3 798 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ankrd2Q9WV06 328 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Znf394Q9Z1D9 521 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm28036V9GXJ1 658 aa8.12□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Shank3Q4ACU6 1730 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm3127E9Q9P5 263 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm3453K7N724 263 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 CraddO88843 199 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Rnf216P58283 853 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 HelqQ2VPA6 1069 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 ItgaeQ60677 1167 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Krt42Q6IFX2 452 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Efcab14Q8BGQ6 484 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tbc1d10cQ8C9V1 444 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Slc35f6Q8VE96 372 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Dqx1Q924H9 718 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Ifi202Q9R002 445 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cacna2d3Q9Z1L5 1091 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Nup98Q6PFD9 1816 aaKnown RBP8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 C87977A2A958 498 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Klhl33G3UW92 533 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 ProcP33587 460 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Adcy7P51829 1099 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm10488Q4KL05 212 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Trim37Q6PCX9 961 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Tor4aQ8BH02 426 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 AopepQ8BXQ6 817 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Uchl3Q9JKB1 230 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 SynrgQ5SV85 1306 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Scn11aQ9R053 1765 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Fyb2A2A995 729 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gpr161B2RPY5 545 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Flvcr1B2RXV4 560 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Cfap70D3YVL2 1141 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Gm4297D3YWB7 211 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 4930523C07RikE9Q2T4 99 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Exoc4O35382 975 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Eif3dO70194 548 aaKnown RBP8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Serpina1aP07758 413 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Art2aP17981 287 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Serpina1bP22599 413 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Usp4P35123 962 aa8.11□□□□□ -1.11
Bdnf-207ENSMUST00000111047 Myo1fP70248 1099 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms