RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Ccdc78D3Z5T1 437 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 XlrP05531 208 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Cst8P32766 142 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Rbm46P86049 533 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Sec31aQ3UPL0 1230 aaKnown RBP13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 CtcfQ61164 736 aaKnown RBP13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 KaznQ69ZS8 779 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Atp1a2Q6PIE5 1020 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Stoml1Q8CI66 399 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Reep2Q8VCD6 254 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 YwhabQ9CQV8 246 aaKnown RBP13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Aldh1b1Q9CZS1 519 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Lrrc57Q9D1G5 239 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 PycardQ9EPB4 193 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Sertad2Q9JJG5 309 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Adgrf5G5E8Q8 1348 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 MafgO54790 162 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Hoxc10P31257 342 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Gtf2bP62915 316 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 NogP97466 232 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Klra9Q2TJJ8 266 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Tfcp2l1Q3UNW5 479 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 E2f8Q58FA4 860 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Lrrc45Q8CIM1 670 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Smc1aQ9CU62 1233 aaKnown RBP13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 2310002L09RikQ9D7L5 217 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Lonp2Q9DBN5 852 aa13.37□□□□□ -0.27
Actb-201ENSMUST00000100497 Lmod3E9QA62 571 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Got1P05201 413 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 CfhP06909 1234 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 H2afzP0C0S6 128 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Tal1P22091 329 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Ttc39dQ0VF76 604 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 H2afvQ3THW5 128 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Slc7a6osQ7TPE5 306 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Sh3d21Q7TSG5 549 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Bola2Q8BGS2 86 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Lin9Q8C735 542 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Serpinb13Q8CDC0 389 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Usp15Q8R5H1 981 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Olfr805Q8VFI4 319 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 BrdtQ91Y44 956 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Rnf6Q9DBU5 667 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 ThegQ9JMB1 375 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Ercc4Q9QZD4 917 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Slc12a7Q9WVL3 1083 aa13.36□□□□□ -0.27
Actb-201ENSMUST00000100497 Brca1P48754 1812 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Otud7bB2RUR8 840 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Fgl2P12804 432 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 PtpraP18052 829 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Hps5P59438 1126 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Oog4Q4G0C7 502 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Znf354cQ571J5 560 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Wdr3Q8BHB4 942 aaKnown RBP13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Olfml3Q8BK62 406 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Q8C1R3 189 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Vcpip1Q8CDG3 1220 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Slc12a8Q8VI23 705 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Creb3l3Q91XE9 479 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Gm3409A0A0G2JE67 319 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Pja1O55176 578 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 LeprP48356 1162 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Lrch1P62046 709 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Cyp11b1Q3TG86 501 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Rapgef1Q3UHC1 1224 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Six2Q62232 296 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Tfe3Q64092 572 aaKnown RBP13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Secisbp2lQ6A098 1086 aaKnown RBP13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Serpinb3dQ6UKZ0 387 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 NkrfQ8BY02 690 aaKnown RBP13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Phc3Q8CHP6 981 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Spon1Q8VCC9 807 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Nrbp2Q91V36 499 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Ascc2Q91WR3 749 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Tas1r3Q925D8 858 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Ubxn6Q99PL6 442 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Galnt15Q9D2N8 638 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Llcfc1Q9D9P8 108 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Mxra8Q9DBV4 442 aa13.35□□□□□ -0.27
Actb-201ENSMUST00000100497 Cntnap2Q9CPW0 1332 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Map7d2A2AG50 781 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Exoc3l2D3YUP5 789 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Dnajc21E9Q8D0 531 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Gimap9G3X987 291 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Dnajb6O54946 365 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Cd68P31996 326 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Actn4P57780 912 aaKnown RBP13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Vsnl1P62761 191 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Carmil2Q3V3V9 1296 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Cnot7Q60809 285 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Kcnk18Q6VV64 394 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Nsun6Q7TS68 476 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 TbataQ7TSD4 393 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Ipo5Q8BKC5 1097 aaKnown RBP13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Pnma1Q8C1C8 353 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Zswim4Q8C7B8 1101 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Spata2Q8K004 515 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Prpf4Q9DAW6 521 aaKnown RBP13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 CsadQ9DBE0 493 aa13.34□□□□□ -0.27
Actb-201ENSMUST00000100497 Spock2Q9ER58 423 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms