RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Myo1gQ5SUA5 1024 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Serpinb6Q60854 378 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Polr2eQ80UW8 210 aaKnown RBP7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Usp6nlQ80XC3 819 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Elac2Q80Y81 831 aaKnown RBP7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Tmx3Q8BXZ1 456 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ints5Q8CHT3 1018 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Bag5Q8CI32 447 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Fbxw7Q8VBV4 629 aa7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Prpf6Q91YR7 941 aaKnown RBP7.62□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ssc5dQ8BV57 1371 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 PfasQ5SUR0 1337 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ccdc194A0A140LIT1 234 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Slfn3A0A1L1STQ7 640 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Stag2O35638 1231 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Magea8O89012 320 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Hoxb8P09632 243 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Lmnb2P21619 596 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Pcbp1P60335 356 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ppp1r13bQ62415 1087 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Jade3Q6IE82 823 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Zmym6Q8BS54 1249 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Pgm5Q8BZF8 567 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Spats2Q8K1N4 545 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Polr3fQ921X6 316 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Pabpc6Q9D4E6 643 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Dpf1Q9QX66 387 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vmn2r55G3UWZ4 781 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vmn2r53L7N473 806 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vmn2r1O70410 912 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Hk1P17710 974 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Kcnj2P35561 428 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Tlr7P58681 1050 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Palb2Q3U0P1 1104 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Nr2c1Q505F1 590 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Krt77Q6IFZ6 572 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Tor4aQ8BH02 426 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vps37aQ8CHS8 397 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Mtmr4Q91XS1 1190 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Znhit2Q9QY66 399 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Rhox3cA2AWM0 215 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 4930444G20RikD3Z741 495 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Rhox3hL7MU37 215 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Aimp1P31230 310 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 PrkcbP68404 671 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Mark2Q05512 776 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Lmntd2Q0VET5 664 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Upf3bQ3ULL6 472 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Rhox3aQ4TU90 215 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ccdc25Q78PG9 208 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Atxn2lQ7TQH0 1049 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Pak4Q8BTW9 593 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ttc39bQ8BYY4 617 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Cplx3Q8R1B5 158 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ppp1r16aQ923M0 524 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 GakQ99KY4 1305 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Dthd1E9PZX1 795 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Krt90E9Q1Z0 538 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Btg4O70552 250 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ranbp1P34022 203 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Gcnt1Q09324 428 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Specc1lQ2KN98 1118 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ccdc114Q3UX62 658 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ubash3aQ3V3E1 624 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ddx49Q4FZF3 480 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Aldh16a1Q571I9 802 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Khdrbs1Q60749 443 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ift20Q61025 132 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Acad11Q80XL6 779 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 MtbpQ8BJS8 894 aaKnown RBP7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Rps6kc1Q8BLK9 1056 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Epc2Q8C0I4 808 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 NapgQ9CWZ7 312 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Bcl2l12Q9D3J3 255 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 DgkeQ9R1C6 564 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Diaph3Q9Z207 1171 aa7.61□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Rrn3B2RS91 656 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Cyp19a1P28649 503 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Guca1aP43081 202 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Etv6P97360 485 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Oog3Q3UWY1 500 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 4933427I04RikQ3V053 235 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Zfp397Q7TNK4 527 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ublcp1Q8BGR9 318 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vps50Q8CI71 964 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Olfr397Q8VEZ6 315 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Stx12Q9ER00 274 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Lcn6A2AJB9 181 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Abhd12bG3UZN6 359 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Taf1bP97358 586 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 CkbQ04447 381 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ece1Q4PZA2 769 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ccdc68Q8BVC4 333 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Arhgap24Q8C4V1 747 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Gpc3Q8CFZ4 579 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Vps37cQ8R105 352 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Ddah1Q9CWS0 285 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Stat2Q9WVL2 923 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Man1b1A2AJ15 658 aa7.6□□□□□ -1.19
Scn1a-202ENSMUST00000094951 Skint6A7XUZ6 1240 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms