RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Fscn2Q32M02 492 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Drc7Q6V3W6 876 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Plppr4Q7TME0 766 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Prpf40bQ80W14 870 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Kcnk13Q8R1P5 405 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ca9Q8VHB5 437 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Slc14a1Q8VHL0 384 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Xpo4Q9ESJ0 1151 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fmnl1Q9JL26 1094 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 PfkpQ9WUA3 784 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Myh11O08638 1972 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm45208A0A140LJ36 292 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sept4P28661 478 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fam214aQ69ZK7 1075 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ddx10Q80Y44 875 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Enox1Q8BHR2 643 aaKnown RBP10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Anks1bQ8BIZ1 1259 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tsen34Q8BMZ5 316 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tmem134Q8R0J4 195 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Atp2a1Q8R429 994 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Psmd2Q8VDM4 908 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Olfr390Q8VEZ7 311 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Pls3Q99K51 630 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Filip1Q9CS72 1211 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Msgn1Q9JK54 188 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 AmfrQ9R049 643 aa10.93□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 4932429P05RikA2ADI4 785 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Lrrc38A2VDH3 298 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gimd1E9PW74 217 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Nr2f2P43135 414 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mcm5P49718 733 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sema5bQ60519 1093 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mtmr10Q7TPM9 771 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Arrdc3Q7TPQ9 414 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ankfy1Q810B6 1169 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fam161bQ8CB59 589 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 GneQ91WG8 722 aaKnown RBP10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tor1aip1Q921T2 595 aaKnown RBP10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rsph3bQ9DA80 389 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Trim44Q9QXA7 346 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 NfkbieO54910 364 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Pank4Q80YV4 820 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Grik4Q8BMF5 956 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Med10Q9CXU0 135 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 DexiQ9WUQ7 95 aa10.92□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Prl2c3P04768 224 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 EdnrbP48302 442 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 PtpreP49446 699 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tmod1P49813 359 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Xpnpep1Q6P1B1 623 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 NkrfQ8BY02 690 aaKnown RBP10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Agbl2Q8CDK2 862 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Dhx30Q99PU8 1217 aaKnown RBP10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cntn6Q9JMB8 1028 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ripk3Q9QZL0 486 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Zscan25B2RX31 543 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gm13128L7MU96 475 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sptlc1O35704 473 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Dcaf17Q3TUL7 519 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sh3d21Q7TSG5 549 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Fam155aQ8CCS2 467 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mfap3Q922T2 349 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rhobtb3Q9CTN4 611 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Smyd3Q9CWR2 428 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Sbno2Q7TNB8 1349 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Nfxl1E9Q8I7 918 aaKnown RBP10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Exoc4O35382 975 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Slu7Q8BHJ9 585 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Armcx3Q8BHS6 379 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tmem63cQ8CBX0 802 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Oit3Q8R4V5 546 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ribc1Q9D0B8 379 aa10.91□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Pdrg1P59048 133 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 LxnP70202 222 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 GaaP70699 953 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 LbpQ61805 481 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Traf3ip3Q8C0G2 513 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Mamdc2Q8CG85 686 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Taco1Q8K0Z7 294 aaKnown RBP10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Olfr1494Q8VGP8 315 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Olfr395Q8VGR3 312 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 1700016D06RikQ9DAA5 166 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Jakmip2D3YXK0 820 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ugt1a8D3Z748 530 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Ugt1a10E9PXN7 530 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cetn3O35648 167 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Adssl1P28650 457 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cct6aP80317 531 aaKnown RBP10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 ZbbxQ0P5X5 716 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cfap157Q0VFX2 523 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Gpatch11Q3UFS4 262 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Rbm12b2Q66JV4 834 aaKnown RBP10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Slc7a6osQ7TPE5 306 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Q8BGN9 141 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 HyiQ8R1F5 277 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Cspp1B2RX88 1205 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Clk2O35491 499 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Tpm2P58774 284 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Palb2Q3U0P1 1104 aa10.9□□□□□ -0.66
Ccdc38-201ENSMUST00000092215 Klra7Q60654 280 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms