RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Pdia6Q922R8 440 aaKnown RBP16.27■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Gimap4Q99JY3 219 aa16.27■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Vmn2r79E9Q067 851 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nmt2O70311 529 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Trim38Q5SZ99 471 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 HiraQ61666 1015 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 L3mbtl3Q8BLB7 883 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pabpc6Q9D4E6 643 aaKnown RBP16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Cep85lA0A1W2P884 806 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 1700016G14RikA0A286YCZ6 238 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 L1camP11627 1260 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Otud5Q3U2S4 566 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 BC048507Q80ZS7 89 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Thoc1Q8R3N6 657 aaKnown RBP16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Dbn1Q9QXS6 706 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nid2O88322 1403 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Zyg11aA2BFL2 627 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 P01734 135 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 TbckQ8BM85 762 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ano4Q8C5H1 955 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Tns3Q5SSZ5 1440 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 CcnoP0C242 352 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 SpdyaQ5IBH7 310 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Stxbp2Q64324 593 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Phactr3Q8BYK5 558 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ccdc103Q9D9P2 237 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Brpf3B2KF05 1204 aaKnown RBP16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 IkbkbO88351 757 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 OsbpQ3B7Z2 805 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pnpt1Q8K1R3 783 aaKnown RBP16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Polr3fQ921X6 316 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Fmnl1Q9JL26 1094 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rps6ka4Q9Z2B9 773 aa16.26■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Lrriq1Q0P5X1 1673 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Acot5Q6Q2Z6 421 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 TdrkhQ80VL1 560 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rabgef1Q9JM13 491 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Myo3bQ1EG27 1305 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Usp10P52479 792 aaKnown RBP16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rbp7Q9EPC5 134 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ttc38A3KMP2 465 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Hoxd10P28359 340 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ephb4P54761 987 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Vmn1r209Q5NC97 312 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Mapk6Q61532 720 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Mtmr10Q7TPM9 771 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Fam161bQ8CB59 589 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ints9Q8K114 658 aaKnown RBP16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Tasp1Q8R1G1 420 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rgs3Q9DC04 966 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Abcc3B2RX12 1523 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rusc2Q80U22 1514 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pfkfb3A7UAK5 555 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 AF366264G3X9P9 502 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Trappc3O55013 180 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Zbtb39Q6PDK0 712 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Fbxo18Q8K2I9 1042 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Agr3Q8R3W7 165 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Anapc7Q9WVM3 565 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Drp2Q05AA6 957 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Oog4Q4G0C7 502 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nfe2l2Q60795 597 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 PrcpQ7TMR0 491 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 N4bp3Q8C7U1 537 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Fads3Q9JJE7 449 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ptk2bQ9QVP9 1009 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Cul1Q9WTX6 776 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Slfn1Q9Z0I7 337 aa16.25■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Kiaa1551Q5DTW7 1521 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Gm5926E9PWJ8 236 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Cyth2P63034 400 aaKnown RBP16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pald1P70261 859 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Lmntd2Q0VET5 664 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 CybbQ61093 570 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Q66JV7 365 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pabpc4Q6PHQ9 660 aaKnown RBP16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nme8Q715T0 586 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Ece2Q80Z60 881 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Crlf3Q9Z2L7 442 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Pabpc1lA2A5N3 607 aaKnown RBP16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Clcn6O35454 870 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 RpsaP14206 295 aaKnown RBP16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nr5a1P33242 462 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Anks1aP59672 1150 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Akap4Q60662 849 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Nim1kQ8BHI9 436 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Tcp11l2Q8K1H7 517 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Appl1Q8K3H0 707 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Olfr397Q8VEZ6 315 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Anxa13Q99JG3 317 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Mfap3lQ9D3X9 409 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Gstt4Q9D4P7 240 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Rbp3P49194 1234 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Usp50Q6P8X6 390 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 ScocQ78YZ6 125 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 LzicQ8K3C3 190 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Snx24Q9CRB0 169 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Micu3Q9CTY5 523 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 Spata31E9QAF0 1014 aa16.24■□□□□ 0.19
Atg4d-201ENSMUST00000065005 E2f6O54917 272 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms