RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Fam205aA2APU8 1308 aa17.5■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ace3D0G895 737 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gm3095E9Q058 166 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Clcn6O35454 870 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Chmp6P0C0A3 200 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Atp8a1P70704 1164 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fbln1Q08879 705 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Edem3Q2HXL6 931 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Dcaf17Q3TUL7 519 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Lamc2Q61092 1191 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ppp2r5aQ6PD03 486 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Efcab14Q8BGQ6 484 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Dhx58Q99J87 678 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 1700109H08RikQ9D9C0 210 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ambra1A2AH22 1300 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Prdm11A2AGX3 565 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Pdk4O70571 412 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Vmn1r209Q5NC97 312 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Oca2Q62052 833 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 E2f7Q6S7F2 904 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 MslnlQ8C160 685 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Oxnad1Q8VE38 311 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 CrygnQ8VHL5 183 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Thumpd2Q9CZB3 528 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Cfap57Q9D180 1249 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Lrp2bpQ9D4C6 346 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Uchl3Q9JKB1 230 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Rnf4Q9QZS2 194 aa17.49■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Stk10O55098 966 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 ChkbO55229 394 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Eps15P42567 897 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tlr8P58682 1032 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Rapgef1Q3UHC1 1224 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ndufaf2Q59J78 168 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Meis1Q60954 390 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fbxo11Q7TPD1 930 aaKnown RBP17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tcp10aQ80W76 438 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Q8BGD0 127 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ppfia2Q8BSS9 1257 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ttc16Q8C1F5 767 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ccdc113Q8C5T8 377 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 PhykplQ8R1K4 467 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 OscarQ8VBT3 265 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Yipf1Q91VU1 306 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tmem174Q9DCX7 243 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Hebp1Q9R257 190 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tnip1Q9WUU8 647 aa17.48■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Osbpl7A2A716 963 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 1700003F12RikA2AKE5 210 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Cfap70D3YVL2 1141 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Xxylt1Q3U4G3 392 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Syne3Q4FZC9 975 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Inpp4bQ6P1Y8 924 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ttyh3Q6P5F7 524 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 AdalQ80SY6 360 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Cplx4Q80WM3 160 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ms4a5Q810P8 197 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 SfpqQ8VIJ6 699 aaKnown RBP17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 IscuQ9D7P6 168 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gfpt2Q9Z2Z9 682 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Col5a2Q3U962 1497 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 1700017N19RikA0A087WPJ1 469 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 1700016G14RikA0A286YCZ6 238 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Nova2D3YVV7 556 aaKnown RBP17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Gm2030D3Z7C4 212 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Msh2P43247 935 aaKnown RBP17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Psmd1Q3TXS7 953 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ddx49Q4FZF3 480 aaKnown RBP17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Znf354cQ571J5 560 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Brip1Q5SXJ3 1174 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 FtoQ8BGW1 502 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Znf771Q8BJ90 317 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Unc5bQ8K1S3 945 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Dennd1aQ8K382 1016 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Pabpc6Q9D4E6 643 aaKnown RBP17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Drap1Q9D6N5 205 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ubiad1Q9DC60 336 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Serpinb6cW4VSP4 379 aa17.47■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 R3hdm1E9Q9Q2 1135 aaKnown RBP17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 HelqQ2VPA6 1069 aa17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Vps52Q8C754 723 aaKnown RBP17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Fam20aQ8CID3 541 aa17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Mrpl11Q9CQF0 192 aaKnown RBP17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Ctnnbl1Q9CWL8 563 aaKnown RBP17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Irx5Q9JKQ4 484 aa17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Phtf1Q9QZ09 761 aa17.46■□□□□ 0.39
Ttc39b-202ENSMUST00000048274 Tbc1d16A2ABG4 766 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Sclt1G5E861 688 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 GcP21614 476 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Lrrc36Q3V0M2 755 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Cnot7Q60809 285 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ppp2r5cQ60996 524 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Myo6Q64331 1265 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Tspyl5Q69ZB3 406 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Tbx22Q8K402 517 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Pdxdc1Q99K01 787 aaKnown RBP17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 4930550L24RikQ99PA7 320 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Mis12Q9CY25 206 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Rabl3Q9D4V7 236 aa17.45■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Stk4Q9JI11 487 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 131.4 ms