RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Scyl2Q8CFE4 930 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tcp11l2Q8K1H7 517 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 GldcQ91W43 1025 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Desi2Q9D291 194 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gyg1Q9R062 333 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Slc12a7Q9WVL3 1083 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Adgra2Q91ZV8 1336 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm4985A2ALC6 410 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Trim5E9PV98 497 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Exoc4O35382 975 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 MafbP54841 323 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cct6aP80317 531 aaKnown RBP9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Nucb2P81117 420 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Casp7P97864 303 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tgfbrap1Q3UR70 860 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rab3il1Q8VDV3 383 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Olfr397Q8VEZ6 315 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pcdhac2Q91Y09 1006 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cntn6Q9JMB8 1028 aa9.55□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm7086A0A1W2P766 342 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Apol6B7ZC55 329 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gimap9G3X987 291 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gm8298J3QPI0 401 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 RaraP11416 462 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gna14P30677 355 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Muc1Q02496 630 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tcerg1lQ3B807 590 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Capn13Q3UW68 665 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Specc1Q5SXY1 1067 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Sema5bQ60519 1093 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rcor2Q8C796 523 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Reep2Q8VCD6 254 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zcchc18Q8VD24 393 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ddx27Q921N6 760 aaKnown RBP9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 CenpqQ9CPQ5 267 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Col4a3Q9QZS0 1669 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ttll10A4Q9F3 704 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 GclmO09172 274 aaKnown RBP9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rpl13P47963 211 aaKnown RBP9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Gzf1Q4VBD9 706 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ahcyl2Q68FL4 613 aaKnown RBP9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Hook2Q7TMK6 716 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Slc7a6osQ7TPE5 306 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 3830417A13RikQ8BQJ2 303 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Olfr805Q8VFI4 319 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 CutaQ9CQ89 177 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Kdm8Q9CXT6 414 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cnga3Q9JJZ8 631 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 1700016G14RikA0A286YCZ6 238 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Magea10A2AMW4 325 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 MafgO54790 162 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Men1O88559 611 aaKnown RBP9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 TdgP56581 421 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Psmb7P70195 277 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 RenbpP82343 430 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pou2f2Q00196 463 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tff2Q03404 129 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Acot6Q32Q92 419 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tnfaip8l3Q3TBL6 204 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pdlim7Q3TJD7 457 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 R3hdm4Q4VBF2 262 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tbx2Q60707 711 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Atp6v0d2Q80SY3 350 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Dpp9Q8BVG4 862 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Stoml1Q8CI66 399 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Acot11Q8VHQ9 594 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ppp1r3aQ99MR9 1089 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Lpin2Q99PI5 893 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Vstm4T1NXB5 319 aa9.54□□□□□ -0.88
Trim39-201ENSMUST00000042717 Sema4dO09126 861 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Kcnh2O35219 1162 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Eif3dO70194 548 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Phka1P18826 1241 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pbx1P41778 430 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rbp3P49194 1234 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 VegfbP49766 207 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Fam189a2Q4FZH1 290 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 DeptorQ570Y9 409 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Bag1Q60739 355 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Krt31Q61765 416 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cwf19l2Q8BG79 887 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Fbxo44Q8BK26 255 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Vps52Q8C754 723 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Znf467Q8JZL0 594 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Smtnl1Q99LM3 459 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Apopt1Q9CQW7 192 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ccdc96Q9CR92 584 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mfap3lQ9D3X9 409 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Egfl6Q9JJZ5 550 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 PolkQ9QUG2 852 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Myh9Q8VDD5 1960 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Smim10l2aA0A0B4J1F8 78 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Chrna9G3X8Z7 479 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cyth3O08967 399 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Clcn3P51791 818 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Arhgap1Q5FWK3 439 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Actn1Q7TPR4 892 aaKnown RBP9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ankfy1Q810B6 1169 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Pnma3Q8JZW8 466 aa9.53□□□□□ -0.88
Trim39-201ENSMUST00000042717 Arl8aQ8VEH3 186 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms