RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ece2Q80Z60 881 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Ift74Q8BKE9 600 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Oxnad1Q8VE38 311 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Pcdha5Q91Y15 934 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Q9D5Q8 446 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 1700109H08RikQ9D9C0 210 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Stk4Q9JI11 487 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Uchl3Q9JKB1 230 aa16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 Orc1Q9Z1N2 840 aaKnown RBP16.27■□□□□ 0.2
Nup54-201ENSMUST00000038514 CraddO88843 199 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tp53P02340 387 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 RxrbP28704 520 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Snap25P60879 206 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Atp8a1P70704 1164 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Phactr1Q2M3X8 580 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tatdn3Q3U1C6 294 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Eme2Q56A04 373 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Znf652Q5DU09 608 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Myo6Q64331 1265 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ttyh3Q6P5F7 524 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 CgasQ8C6L5 507 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Dnm1lQ8K1M6 742 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 PhykplQ8R1K4 467 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pdxdc1Q99K01 787 aaKnown RBP16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Dph5Q9CWQ0 281 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fthl17aQ9DAX0 182 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Arhgef7Q9ES28 862 aa16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ddx20Q9JJY4 825 aaKnown RBP16.27■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ppfibp2O35711 882 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 AfpP02772 605 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Lig3P97386 1015 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Best3Q6H1V1 669 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Foxo6Q70KY4 559 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Bcas3Q8CCN5 928 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Dennd1aQ8K382 1016 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pstpip2Q99M15 334 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Drap1Q9D6N5 205 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Llcfc1Q9D9P8 108 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Phtf1Q9QZ09 761 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Eya4Q9Z191 616 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ltbp1Q8CG19 1712 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Col5a2Q3U962 1497 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm8298J3QPI0 401 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Terf1P70371 421 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Znf697Q569E7 569 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Kiaa1211Q5PR69 1207 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Adad1Q5SUE7 619 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Atp13a4Q5XF90 1193 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 A1cfQ5YD48 595 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pcsk7Q61139 770 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Xlr3bQ6P205 226 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Tarsl2Q8BLY2 790 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Depdc1aQ8CIG0 804 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fam133bQ9CVI2 245 aaKnown RBP16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Mis12Q9CY25 206 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Acsl3Q9CZW4 720 aaKnown RBP16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 PlekQ9JHK5 350 aaKnown RBP16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Rnf4Q9QZS2 194 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Nfs1Q9Z1J3 459 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cacna2d3Q9Z1L5 1091 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ccdc88cQ6VGS5 2009 aa16.26■□□□□ 0.19
Nup54-201ENSMUST00000038514 Sclt1G5E861 688 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gsg1l2M0QWL6 290 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Stk10O55098 966 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Nmt1O70310 496 aaKnown RBP16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 VimP20152 466 aaKnown RBP16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Phactr4Q501J7 694 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Znf354cQ571J5 560 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Vmn1r209Q5NC97 312 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 GmipQ6PGG2 971 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ppfia2Q8BSS9 1257 aa16.25■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm3095E9Q058 166 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Eif3dO70194 548 aaKnown RBP16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Pdk4O70571 412 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 DtnbO70585 659 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fam207aP58468 219 aaKnown RBP16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Oca2Q62052 833 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 MslnlQ8C160 685 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Xpo6Q924Z6 1125 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Ctnnbl1Q9CWL8 563 aaKnown RBP16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cfap57Q9D180 1249 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 IscuQ9D7P6 168 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Serpinb6cW4VSP4 379 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Fbf1A2A870 1173 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm2030D3Z7C4 212 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Epha3P29319 983 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Mmp14P53690 582 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 RalylQ8BTF8 293 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Usp20Q8C6M1 916 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Riox2Q8CD15 465 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Enox2Q8R0Z2 598 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Anapc4Q91W96 807 aa16.24■□□□□ 0.19
Nup54-201ENSMUST00000038514 Lrrc38A2VDH3 298 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cfap70D3YVL2 1141 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Gm10110D3Z5M2 615 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Exoc4O35382 975 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Kif5cP28738 956 aaKnown RBP16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 MlxipQ2VPU4 917 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Scarf1Q5ND28 820 aa16.23■□□□□ 0.19
Nup54-201ENSMUST00000038514 Cep104Q80V31 926 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms