RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 4931423N10RikQ9D4J9 382 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Krt16Q9Z2K1 469 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gm20721E9Q2U8 318 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Nek1P51954 1203 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pank4Q80YV4 820 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Haus4Q8BFT2 363 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Kctd6Q8BNL5 237 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Lpin2Q99PI5 893 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Trp53inp1Q9QXE4 239 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Bub1bQ9Z1S0 1052 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pcdhb14Q6PB90 796 aa17.89■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Rab17P35292 214 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Nme8Q715T0 586 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tex13cD3YU32 604 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ttc17E9PVB5 1198 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Nlrp14Q6B966 993 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 NostrinQ6WKZ7 506 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tekt1Q9DAJ2 418 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gm10250G3X9L6 160 aaKnown RBP17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Prkg1P0C605 671 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tex11Q14AT2 947 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Syne3Q4FZC9 975 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Cyp7b1Q60991 507 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Baiap3Q80TT2 1134 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tcp10aQ80W76 438 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tgif2lx2Q8K5B9 231 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Atp5hQ9DCX2 161 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fut8Q9WTS2 575 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Apol6B7ZC55 329 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tac1P41539 130 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 WhammQ571B6 793 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Trim38Q5SZ99 471 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Wbp4Q61048 376 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pramel6Q810Y9 485 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tmem179Q8BHH9 233 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ccdc127Q3TC33 260 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Scyl1Q9EQC5 806 aaKnown RBP17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ccdc22Q9JIG7 627 aa17.88■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Lbhd1A0A087WPA0 259 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 P4hbP09103 509 aaKnown RBP17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Rab20P35295 233 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Stat4P42228 749 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pfkfb2P70265 519 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Atg9aQ68FE2 551 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 GnptabQ69ZN6 1235 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pde8aO88502 823 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Zbtb7bQ64321 544 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Lmbrd1Q8K0B2 537 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Kcnq3Q8K3F6 873 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 JrklB2RRL2 523 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 LdhbP16125 334 aaKnown RBP17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 S100a9P31725 113 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Il1rapl1P59823 695 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 McamQ8R2Y2 648 aaKnown RBP17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 DgkkE9Q7N4 1118 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pgk2P09041 417 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 BaatQ91X34 420 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Capn9Q9D805 690 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Shcbp1Q9Z179 668 aa17.87■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fam47eD3YWC7 402 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gm4871D3Z0W7 314 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Rad51bO35719 350 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ccnd1P25322 295 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 HomezQ80W88 542 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 BlmhQ8R016 455 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ppp2r5dQ91V89 594 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ascc1Q9D8Z1 356 aaKnown RBP17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Mtmr2Q9Z2D1 643 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Slc39a2G3X943 309 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tpp1O89023 562 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Trim75Q3UWZ0 467 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Glra4Q61603 456 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 AopepQ8BXQ6 817 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ddx20Q9JJY4 825 aaKnown RBP17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Atp10bB1AWN4 1474 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Grin2dQ03391 1323 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gbp11A9YVJ5 442 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Xbp1O35426 267 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pnpt1Q8K1R3 783 aaKnown RBP17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ttll1Q91V51 423 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ddx47Q9CWX9 455 aaKnown RBP17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Sesn3Q9CYP7 492 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Snx5Q9D8U8 404 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pyroxd1Q3TMV7 498 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tldc1Q8K0P3 455 aa17.86■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ino80Q6ZPV2 1559 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ptk6Q64434 451 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Ing2Q9ESK4 281 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Nmt2O70311 529 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Gngt2Q61017 69 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 HarsQ61035 509 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 TxlngQ8BHN1 524 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Phactr3Q8BYK5 558 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tma7Q8K003 64 aaKnown RBP17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Pstpip2Q99M15 334 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Krt34Q9D646 392 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Fip1l1Q9D824 581 aaKnown RBP17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Exoc4O35382 975 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Nr2f2P43135 414 aa17.85■□□□□ 0.45
Col17a1-201ENSMUST00000026045 Tmem247Q497K7 211 aa17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms