RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	YDR341C	Q05506	607 aa	Known RBP	2.23	□□□□□ -2.05
YPR172W	YPR172W	NSE1	Q07913	336 aa		2.23	□□□□□ -2.05
YPR172W	YPR172W	VPS54	Q12071	889 aa		2.23	□□□□□ -2.05
YPR172W	YPR172W	AEP3	Q12089	606 aa		2.23	□□□□□ -2.05
YPR172W	YPR172W	TIR4	Q12218	487 aa	Predicted RBP	2.23	□□□□□ -2.05
YPR172W	YPR172W	RPS18A	P0CX55	146 aa	Known RBP	2.22	□□□□□ -2.05
YPR172W	YPR172W	RPS18B	P0CX56	146 aa	Predicted RBP	2.22	□□□□□ -2.05
YPR172W	YPR172W	ADK2	P26364	225 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	ZTA1	P38230	334 aa	Known RBP	2.22	□□□□□ -2.05
YPR172W	YPR172W	ATM1	P40416	690 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	YIR035C	P40579	254 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	KEG1	P43614	200 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	SEH1	P53011	349 aa	Known RBP	2.22	□□□□□ -2.05
YPR172W	YPR172W	VAC7	P53950	1165 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	MCT1	Q12283	360 aa		2.22	□□□□□ -2.05
YPR172W	YPR172W	TPK3	P05986	398 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	RPC53	P25441	422 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	LDS1	P31379	325 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	TIR2	P33890	251 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	PRY2	P36110	329 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	RRN9	P53437	365 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	RMT2	Q03305	412 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	YMR010W	Q03687	405 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	ERB1	Q04660	807 aa	Known RBP	2.21	□□□□□ -2.06
YPR172W	YPR172W	YLR177W	Q06251	628 aa		2.21	□□□□□ -2.06
YPR172W	YPR172W	ARF1	P11076	181 aa	Known RBP	2.2	□□□□□ -2.06
YPR172W	YPR172W	CLB1	P24868	471 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	SLM5	P25345	492 aa	Known RBP	2.2	□□□□□ -2.06
YPR172W	YPR172W	ZIP1	P31111	875 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	RIM1	P32445	135 aa	Known RBP	2.2	□□□□□ -2.06
YPR172W	YPR172W	TOA1	P32773	286 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	DOA1	P36037	715 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	WSC4	P38739	605 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	GEP4	P38812	185 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	FHL1	P39521	936 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	SER3	P40054	469 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	CPR7	P47103	393 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	PIB2	P53191	635 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	YDR131C	Q03899	556 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	YDR115W	Q04598	105 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	ISA2	Q12425	185 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	YOL085C	Q99345	113 aa		2.2	□□□□□ -2.06
YPR172W	YPR172W	RPL12A	P0CX53	165 aa	Known RBP	2.19	□□□□□ -2.06
YPR172W	YPR172W	RPL12B	P0CX54	165 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	EPT1	P22140	391 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	CPR2	P23285	205 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	ERV1	P27882	189 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	PDC2	P32896	925 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	SHE3	P38272	425 aa	Known RBP	2.19	□□□□□ -2.06
YPR172W	YPR172W	SPO73	P40031	143 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	ASN2	P49090	572 aa	Known RBP	2.19	□□□□□ -2.06
YPR172W	YPR172W	TOS2	P50078	622 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	VEL1	P53058	206 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	CWC22	P53333	577 aa	Known RBP	2.19	□□□□□ -2.06
YPR172W	YPR172W	HST4	P53688	370 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	DDC1	Q08949	612 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	SRO7	Q12038	1033 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	RNH203	Q12338	110 aa		2.19	□□□□□ -2.06
YPR172W	YPR172W	CHA1	P25379	360 aa	Known RBP	2.18	□□□□□ -2.06
YPR172W	YPR172W	TOA2	P32774	122 aa		2.18	□□□□□ -2.06
YPR172W	YPR172W	MPE1	P35728	441 aa	Known RBP	2.18	□□□□□ -2.06
YPR172W	YPR172W	PTK1	P36002	662 aa	Predicted RBP	2.18	□□□□□ -2.06
YPR172W	YPR172W	ZIM17	P42844	174 aa		2.18	□□□□□ -2.06
YPR172W	YPR172W	RNH201	P53942	307 aa		2.18	□□□□□ -2.06
YPR172W	YPR172W	YLR456W	Q06199	204 aa		2.18	□□□□□ -2.06
YPR172W	YPR172W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
YPR172W	YPR172W	ANP1	P32629	500 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
YPR172W	YPR172W	AGA2	P32781	87 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	SMP1	P38128	452 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	PAC11	P40960	533 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	TCB2	P48231	1178 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	RPN14	P53196	417 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	URC2	Q04411	772 aa		2.17	□□□□□ -2.06
YPR172W	YPR172W	UNG1	P12887	359 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	MSP1	P28737	362 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	SPS19	P32573	292 aa	Known RBP	2.16	□□□□□ -2.06
YPR172W	YPR172W	PXA2	P34230	853 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	QDR3	P38227	689 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	SRP72	P38688	640 aa	Known RBP	2.16	□□□□□ -2.06
YPR172W	YPR172W	TRR2	P38816	342 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	SEC27	P41811	889 aa	Known RBP	2.16	□□□□□ -2.06
YPR172W	YPR172W	CIN2	P46670	268 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	FSH2	Q05015	223 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	SMC6	Q12749	1114 aa		2.16	□□□□□ -2.06
YPR172W	YPR172W	OPI3	P05375	206 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	HEM4	P06174	275 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	RPL16A	P26784	199 aa	Known RBP	2.15	□□□□□ -2.07
YPR172W	YPR172W	PHO91	P27514	894 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	LTV1	P34078	463 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	AST1	P35183	429 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	YBR241C	P38142	488 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	FAD1	P38913	306 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	HEM14	P40012	539 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.15	□□□□□ -2.07	not detected
YPR172W	YPR172W	PMT5	P52867	743 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	YGR111W	P53265	400 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	ZRG17	P53735	605 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	CIK1	Q01649	594 aa		2.15	□□□□□ -2.07
YPR172W	YPR172W	ERO1	Q03103	563 aa		2.15	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms