RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C MSC3Q05812 728 aa2.17□□□□□ -2.06
UBX4YMR067C YHC1Q05900 231 aaKnown RBP2.17□□□□□ -2.06
UBX4YMR067C RPS18AP0CX55 146 aaKnown RBP2.16□□□□□ -2.06
UBX4YMR067C RPS18BP0CX56 146 aaPredicted RBP2.16□□□□□ -2.06
UBX4YMR067C ARF1P11076 181 aaKnown RBP2.16□□□□□ -2.06
UBX4YMR067C MAS2P11914 482 aa2.16□□□□□ -2.06
UBX4YMR067C ERV1P27882 189 aa2.16□□□□□ -2.06
UBX4YMR067C DOA1P36037 715 aa2.16□□□□□ -2.06
UBX4YMR067C KEG1P43614 200 aa2.16□□□□□ -2.06
UBX4YMR067C PIB2P53191 635 aa2.16□□□□□ -2.06
UBX4YMR067C VAC7P53950 1165 aa2.16□□□□□ -2.06
UBX4YMR067C PRP38Q00723 242 aaPredicted RBP2.16□□□□□ -2.06
UBX4YMR067C YLR456WQ06199 204 aa2.16□□□□□ -2.06
UBX4YMR067C MCT1Q12283 360 aa2.16□□□□□ -2.06
UBX4YMR067C RNH203Q12338 110 aa2.16□□□□□ -2.06
UBX4YMR067C RPL12AP0CX53 165 aaKnown RBP2.15□□□□□ -2.07
UBX4YMR067C RPL12BP0CX54 165 aa2.15□□□□□ -2.07
UBX4YMR067C PDX1P16451 410 aa2.15□□□□□ -2.07
UBX4YMR067C RPC53P25441 422 aa2.15□□□□□ -2.07
UBX4YMR067C IME2P32581 645 aa2.15□□□□□ -2.07
UBX4YMR067C TOA1P32773 286 aa2.15□□□□□ -2.07
UBX4YMR067C TIR2P33890 251 aa2.15□□□□□ -2.07
UBX4YMR067C ECM34P38728 170 aa2.15□□□□□ -2.07
UBX4YMR067C GEP4P38812 185 aa2.15□□□□□ -2.07
UBX4YMR067C PAC11P40960 533 aa2.15□□□□□ -2.07
UBX4YMR067C COQ5P49017 307 aa2.15□□□□□ -2.07
UBX4YMR067C TOS2P50078 622 aa2.15□□□□□ -2.07
UBX4YMR067C SEH1P53011 349 aaKnown RBP2.15□□□□□ -2.07
UBX4YMR067C YMR010WQ03687 405 aa2.15□□□□□ -2.07
UBX4YMR067C SPC19Q03954 165 aa2.15□□□□□ -2.07
UBX4YMR067C YDR061WQ12298 539 aa2.15□□□□□ -2.07
UBX4YMR067C LDS1P31379 325 aa2.14□□□□□ -2.07
UBX4YMR067C DBF4P32325 704 aa2.14□□□□□ -2.07
UBX4YMR067C NRP1P32770 719 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
UBX4YMR067C FAD1P38913 306 aa2.14□□□□□ -2.07
UBX4YMR067C CWC22P53333 577 aaKnown RBP2.14□□□□□ -2.07
UBX4YMR067C RMT2Q03305 412 aa2.14□□□□□ -2.07
UBX4YMR067C URC2Q04411 772 aa2.14□□□□□ -2.07
UBX4YMR067C YLR177WQ06251 628 aa2.14□□□□□ -2.07
UBX4YMR067C TIR4Q12218 487 aaPredicted RBP2.14□□□□□ -2.07
UBX4YMR067C APC2Q12440 853 aa2.14□□□□□ -2.07
UBX4YMR067C CHA1P25379 360 aaKnown RBP2.13□□□□□ -2.07
UBX4YMR067C PHO91P27514 894 aa2.13□□□□□ -2.07
UBX4YMR067C TOA2P32774 122 aa2.13□□□□□ -2.07
UBX4YMR067C QDR3P38227 689 aa2.13□□□□□ -2.07
UBX4YMR067C SHE3P38272 425 aaKnown RBP2.13□□□□□ -2.07
UBX4YMR067C ASN2P49090 572 aaKnown RBP2.13□□□□□ -2.07
UBX4YMR067C YGR111WP53265 400 aa2.13□□□□□ -2.07
UBX4YMR067C DIA1P54005 336 aa2.13□□□□□ -2.07
UBX4YMR067C MDH1P17505 334 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
UBX4YMR067C SWE1P32944 819 aa2.12□□□□□ -2.07
UBX4YMR067C LTV1P34078 463 aa2.12□□□□□ -2.07
UBX4YMR067C RCK2P38623 610 aa2.12□□□□□ -2.07
UBX4YMR067C WSC4P38739 605 aa2.12□□□□□ -2.07
UBX4YMR067C YIR035CP40579 254 aa2.12□□□□□ -2.07
UBX4YMR067C PMT5P52867 743 aa2.12□□□□□ -2.07
UBX4YMR067C RNH201P53942 307 aa2.12□□□□□ -2.07
UBX4YMR067C YDR541CQ03049 344 aa2.12□□□□□ -2.07
UBX4YMR067C YDR115WQ04598 105 aa2.12□□□□□ -2.07
UBX4YMR067C NDL1Q06568 189 aa2.12□□□□□ -2.07
UBX4YMR067C YPR195CQ06594 109 aa2.12□□□□□ -2.07
UBX4YMR067C AAD15Q08361 143 aa2.12□□□□□ -2.07
UBX4YMR067C UAF30Q08747 228 aa2.12□□□□□ -2.07
UBX4YMR067C YOL085CQ99345 113 aa2.12□□□□□ -2.07
UBX4YMR067C OPI3P05375 206 aa2.11□□□□□ -2.07
UBX4YMR067C EPT1P22140 391 aa2.11□□□□□ -2.07
UBX4YMR067C RPL16AP26784 199 aaKnown RBP2.11□□□□□ -2.07
UBX4YMR067C ZIP1P31111 875 aa2.11□□□□□ -2.07
UBX4YMR067C ANP1P32629 500 aa2.11□□□□□ -2.07
UBX4YMR067C PDC2P32896 925 aa2.11□□□□□ -2.07
UBX4YMR067C PRY2P36110 329 aa2.11□□□□□ -2.07
UBX4YMR067C FHL1P39521 936 aa2.11□□□□□ -2.07
UBX4YMR067C SEC27P41811 889 aaKnown RBP2.11□□□□□ -2.07
UBX4YMR067C ZIM17P42844 174 aa2.11□□□□□ -2.07
UBX4YMR067C RTT102P53330 157 aa2.11□□□□□ -2.07
UBX4YMR067C ERO1Q03103 563 aa2.11□□□□□ -2.07
UBX4YMR067C ECM7Q06200 448 aa2.11□□□□□ -2.07
UBX4YMR067C ASA1Q06822 443 aa2.11□□□□□ -2.07
UBX4YMR067C NOP6Q07623 225 aaKnown RBP2.11□□□□□ -2.07
UBX4YMR067C DDC1Q08949 612 aa2.11□□□□□ -2.07
UBX4YMR067C SRO7Q12038 1033 aa2.11□□□□□ -2.07
UBX4YMR067C HEM4P06174 275 aa2.1□□□□□ -2.07
UBX4YMR067C PDE2P06776 526 aa2.1□□□□□ -2.07
UBX4YMR067C RNA1P11745 407 aaKnown RBP2.1□□□□□ -2.07
UBX4YMR067C UNG1P12887 359 aa2.1□□□□□ -2.07
UBX4YMR067C YSC83P32792 385 aa2.1□□□□□ -2.07
UBX4YMR067C SPO73P40031 143 aa2.1□□□□□ -2.07
UBX4YMR067C CIN2P46670 268 aa2.1□□□□□ -2.07
UBX4YMR067C CPR7P47103 393 aa2.1□□□□□ -2.07
UBX4YMR067C ABM1P47146 123 aa2.1□□□□□ -2.07
UBX4YMR067C VEL1P53058 206 aa2.1□□□□□ -2.07
UBX4YMR067C ROG1P53118 685 aa2.1□□□□□ -2.07
UBX4YMR067C HST4P53688 370 aa2.1□□□□□ -2.07
UBX4YMR067C VPS72Q03388 795 aa2.1□□□□□ -2.07
UBX4YMR067C FSH2Q05015 223 aa2.1□□□□□ -2.07
UBX4YMR067C LDS2Q08218 356 aa2.1□□□□□ -2.07
UBX4YMR067C RRP7P25368 297 aaPredicted RBP2.09□□□□□ -2.07
UBX4YMR067C MSP1P28737 362 aa2.09□□□□□ -2.07
UBX4YMR067C SPS19P32573 292 aaKnown RBP2.09□□□□□ -2.07
UBX4YMR067C AGA2P32781 87 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms