RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W SWF1Q04629 336 aa5.68□□□□□ -1.5
PRE3YJL001W DIA2Q08496 732 aaPredicted RBP5.68□□□□□ -1.5
PRE3YJL001W LAS17Q12446 633 aa5.68□□□□□ -1.5
PRE3YJL001W FLO9P39712 1322 aa5.68□□□□□ -1.5
PRE3YJL001W MSS18P08593 268 aa5.67□□□□□ -1.5
PRE3YJL001W RPL20AP0CX23 172 aaKnown RBP5.67□□□□□ -1.5
PRE3YJL001W RPL20BP0CX24 172 aaPredicted RBP5.67□□□□□ -1.5
PRE3YJL001W ADH4P10127 382 aa5.67□□□□□ -1.5
PRE3YJL001W PHO81P17442 1178 aa5.67□□□□□ -1.5
PRE3YJL001W MAK32P23060 363 aa5.67□□□□□ -1.5
PRE3YJL001W ERG8P24521 451 aa5.67□□□□□ -1.5
PRE3YJL001W EMP70P32802 667 aa5.67□□□□□ -1.5
PRE3YJL001W LAS1P36146 502 aaPredicted RBP5.67□□□□□ -1.5
PRE3YJL001W PSA1P41940 361 aaKnown RBP5.67□□□□□ -1.5
PRE3YJL001W YJR154WP47181 346 aa5.67□□□□□ -1.5
PRE3YJL001W UPF3P48412 387 aaKnown RBP5.67□□□□□ -1.5
PRE3YJL001W ATP22P50273 684 aaPredicted RBP5.67□□□□□ -1.5
PRE3YJL001W MPA43P53583 542 aaPredicted RBP5.67□□□□□ -1.5
PRE3YJL001W YMR111CQ04461 462 aaPredicted RBP5.67□□□□□ -1.5
PRE3YJL001W APC9Q12107 265 aa5.67□□□□□ -1.5
PRE3YJL001W TRP4P07285 380 aaPredicted RBP5.66□□□□□ -1.5
PRE3YJL001W ILV2P07342 687 aaKnown RBP5.66□□□□□ -1.5
PRE3YJL001W MET3P08536 511 aa5.66□□□□□ -1.5
PRE3YJL001W NMT1P14743 455 aa5.66□□□□□ -1.5
PRE3YJL001W ART10P18634 518 aaKnown RBP5.66□□□□□ -1.5
PRE3YJL001W ERG9P29704 444 aa5.66□□□□□ -1.5
PRE3YJL001W ATS1P31386 333 aa5.66□□□□□ -1.5
PRE3YJL001W MSN2P33748 704 aa5.66□□□□□ -1.5
PRE3YJL001W SPO23P33757 523 aa5.66□□□□□ -1.5
PRE3YJL001W VPS21P36017 210 aaKnown RBP5.66□□□□□ -1.5
PRE3YJL001W SNU114P36048 1008 aaKnown RBP5.66□□□□□ -1.5
PRE3YJL001W TRR2P38816 342 aa5.66□□□□□ -1.5
PRE3YJL001W ATG7P38862 630 aa5.66□□□□□ -1.5
PRE3YJL001W REV7P38927 245 aa5.66□□□□□ -1.5
PRE3YJL001W GET2P40056 285 aa5.66□□□□□ -1.5
PRE3YJL001W XBP1P40489 647 aa5.66□□□□□ -1.5
PRE3YJL001W CIN1P40987 1014 aa5.66□□□□□ -1.5
PRE3YJL001W MUP1P50276 574 aa5.66□□□□□ -1.5
PRE3YJL001W MTL1P53214 551 aa5.66□□□□□ -1.5
PRE3YJL001W IST1P53843 298 aaPredicted RBP5.66□□□□□ -1.5
PRE3YJL001W YPL107WQ02873 248 aa5.66□□□□□ -1.5
PRE3YJL001W MET31Q03081 177 aa5.66□□□□□ -1.5
PRE3YJL001W PFA5Q03289 374 aa5.66□□□□□ -1.5
PRE3YJL001W DLT1Q04216 342 aa5.66□□□□□ -1.5
PRE3YJL001W SEI1Q06058 285 aa5.66□□□□□ -1.5
PRE3YJL001W GAS2Q06135 555 aa5.66□□□□□ -1.5
PRE3YJL001W ESA1Q08649 445 aa5.66□□□□□ -1.5
PRE3YJL001W YOR365CQ08844 703 aa5.66□□□□□ -1.5
PRE3YJL001W POM34Q12445 299 aa5.66□□□□□ -1.5
PRE3YJL001W RRP36Q12481 300 aaPredicted RBP5.66□□□□□ -1.5
PRE3YJL001W DST1P07273 309 aa5.65□□□□□ -1.5
PRE3YJL001W OCA4P25366 362 aa5.65□□□□□ -1.5
PRE3YJL001W PTC6P25646 442 aa5.65□□□□□ -1.5
PRE3YJL001W YME1P32795 747 aa5.65□□□□□ -1.5
PRE3YJL001W YCR087C-AP37263 153 aa5.65□□□□□ -1.5
PRE3YJL001W FES1P38260 290 aa5.65□□□□□ -1.5
PRE3YJL001W SCS2P40075 244 aaKnown RBP5.65□□□□□ -1.5
PRE3YJL001W SMX2P40204 77 aaKnown RBP5.65□□□□□ -1.5
PRE3YJL001W YIL169CP40442 995 aa5.65□□□□□ -1.5
PRE3YJL001W YIL067CP40514 678 aa5.65□□□□□ -1.5
PRE3YJL001W AIM22P47051 409 aa5.65□□□□□ -1.5
PRE3YJL001W PUS4P48567 403 aaKnown RBP5.65□□□□□ -1.5
PRE3YJL001W TPC1P53257 314 aa5.65□□□□□ -1.5
PRE3YJL001W MAL13P53338 473 aa5.65□□□□□ -1.5
PRE3YJL001W EFR3Q03653 782 aaKnown RBP5.65□□□□□ -1.5
PRE3YJL001W PLM2Q04383 521 aa5.65□□□□□ -1.5
PRE3YJL001W SMA2Q04658 369 aa5.65□□□□□ -1.5
PRE3YJL001W YPR091CQ06833 770 aa5.65□□□□□ -1.5
PRE3YJL001W YOS9Q99220 542 aa5.65□□□□□ -1.5
PRE3YJL001W CDC8P00572 216 aa5.64□□□□□ -1.51
PRE3YJL001W ALG7P07286 448 aa5.64□□□□□ -1.51
PRE3YJL001W YFR010W-AP0C5N0 62 aa5.64□□□□□ -1.51
PRE3YJL001W COS2P0CX12 379 aa5.64□□□□□ -1.51
PRE3YJL001W COS3P0CX13 379 aa5.64□□□□□ -1.51
PRE3YJL001W SPS100P13130 326 aa5.64□□□□□ -1.51
PRE3YJL001W REC107P21651 314 aa5.64□□□□□ -1.51
PRE3YJL001W PRE4P30657 266 aa5.64□□□□□ -1.51
PRE3YJL001W UTP9P38882 575 aaKnown RBP5.64□□□□□ -1.51
PRE3YJL001W FAD1P38913 306 aa5.64□□□□□ -1.51
PRE3YJL001W MEP2P41948 499 aa5.64□□□□□ -1.51
PRE3YJL001W COS4P43542 379 aa5.64□□□□□ -1.51
PRE3YJL001W APS3P47064 194 aa5.64□□□□□ -1.51
PRE3YJL001W CDH1P53197 566 aa5.64□□□□□ -1.51
PRE3YJL001W YGR079WP53249 370 aa5.64□□□□□ -1.51
PRE3YJL001W GTR2P53290 341 aa5.64□□□□□ -1.51
PRE3YJL001W YLR460CP54007 376 aa5.64□□□□□ -1.51
PRE3YJL001W RHO4Q00246 291 aa5.64□□□□□ -1.51
PRE3YJL001W RRB1Q04225 511 aaKnown RBP5.64□□□□□ -1.51
PRE3YJL001W MIX14Q04341 121 aa5.64□□□□□ -1.51
PRE3YJL001W HLR1Q04429 423 aa5.64□□□□□ -1.51
PRE3YJL001W YPR172WQ06608 200 aa5.64□□□□□ -1.51
PRE3YJL001W YLL007CQ07799 665 aa5.64□□□□□ -1.51
PRE3YJL001W YLR053CQ12026 108 aa5.64□□□□□ -1.51
PRE3YJL001W GET4Q12125 312 aa5.64□□□□□ -1.51
PRE3YJL001W MTR10Q99189 972 aa5.64□□□□□ -1.51
PRE3YJL001W TAD3Q9URQ3 322 aa5.64□□□□□ -1.51
PRE3YJL001W Q0144Q9ZZW2 109 aa5.64□□□□□ -1.51
PRE3YJL001W RHO2P06781 192 aa5.63□□□□□ -1.51
PRE3YJL001W STE12P13574 688 aa5.63□□□□□ -1.51
PRE3YJL001W DBF20P32328 564 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms