RNA–Protein interactions for RNA: YIR044C

YIR044C, Transcript of Possible pseudogene in strain S288C, yeast

Gene YIR044C, Length 186 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR044C	YIR044C	REX2	P54964	269 aa	Known RBP	1.09	□□□□□ -2.23
YIR044C	YIR044C	SKI8	Q02793	397 aa	Predicted RBP	1.09	□□□□□ -2.23
YIR044C	YIR044C	ERO1	Q03103	563 aa		1.09	□□□□□ -2.23
YIR044C	YIR044C	ENT5	Q03769	411 aa	Known RBP	1.09	□□□□□ -2.23
YIR044C	YIR044C	YLR177W	Q06251	628 aa		1.09	□□□□□ -2.23
YIR044C	YIR044C	YLH47	Q06493	454 aa		1.09	□□□□□ -2.23
YIR044C	YIR044C	NSE1	Q07913	336 aa		1.09	□□□□□ -2.23
YIR044C	YIR044C	YOR338W	Q99326	363 aa		1.09	□□□□□ -2.23
YIR044C	YIR044C	RNA1	P11745	407 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	PUT4	P15380	627 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	PRR1	P28708	518 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	RAD5	P32849	1169 aa	Predicted RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	SKT5	P34226	696 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	MID2	P36027	376 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	SMP1	P38128	452 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	YBR241C	P38142	488 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	KAP104	P38217	918 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	GDI1	P39958	451 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	YER184C	P39961	794 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	SEC27	P41811	889 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	YJL055W	P47044	245 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	ATP22	P50273	684 aa	Predicted RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	VEL1	P53058	206 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	CDH1	P53197	566 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	CLD1	P53264	445 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	CIK1	Q01649	594 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	RPL21A	Q02753	160 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	LOT6	Q07923	191 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	YPQ1	Q12010	308 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	RPL21B	Q12672	160 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	FOL3	Q12676	427 aa	Predicted RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	HTZ1	Q12692	134 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	DET1	Q99288	334 aa	Known RBP	1.08	□□□□□ -2.24
YIR044C	YIR044C	FLO11	P08640	1367 aa		1.08	□□□□□ -2.24
YIR044C	YIR044C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.07	□□□□□ -2.24	RIP-Chip
YIR044C	YIR044C	RPS18A	P0CX55	146 aa	Known RBP	1.07	□□□□□ -2.24
YIR044C	YIR044C	RPS18B	P0CX56	146 aa	Predicted RBP	1.07	□□□□□ -2.24
YIR044C	YIR044C	SCH9	P11792	824 aa	Known RBP	1.07	□□□□□ -2.24
YIR044C	YIR044C	DAP2	P18962	818 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	FUN26	P31381	517 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	PMT2	P31382	759 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	ANP1	P32629	500 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	MDL1	P33310	695 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	LRP1	P38801	184 aa	Known RBP	1.07	□□□□□ -2.24
YIR044C	YIR044C	WSS1	P38838	269 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	FHL1	P39521	936 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	PAC11	P40960	533 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	EPL1	P43572	832 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	1.07	□□□□□ -2.24	not detected
YIR044C	YIR044C	YML6	P51998	286 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	RTT102	P53330	157 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	ALF1	P53904	254 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	PRP38	Q00723	242 aa	Predicted RBP	1.07	□□□□□ -2.24
YIR044C	YIR044C	VHS1	Q03785	461 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	AIM33	Q04516	312 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	PRM6	Q04705	352 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	MSC3	Q05812	728 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	MCH1	Q07376	486 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	PCL9	Q12477	304 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	YBL111C	Q3E7Y5	667 aa		1.07	□□□□□ -2.24
YIR044C	YIR044C	CBP6	P07253	162 aa	Predicted RBP	1.06	□□□□□ -2.24
YIR044C	YIR044C	DBR1	P24309	405 aa	Known RBP	1.06	□□□□□ -2.24
YIR044C	YIR044C	GIT1	P25346	518 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	TOA1	P32773	286 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	ECT1	P33412	323 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	SOL2	P37262	315 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	ATG7	P38862	630 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	ALD5	P40047	520 aa	Known RBP	1.06	□□□□□ -2.24
YIR044C	YIR044C	SEC9	P40357	651 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	TRF5	P48561	642 aa	Known RBP	1.06	□□□□□ -2.24
YIR044C	YIR044C	BIO3	P50277	480 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	FLC3	P53121	802 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	VAC7	P53950	1165 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	RMI1	Q02685	241 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	YDR541C	Q03049	344 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	FSH2	Q05015	223 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	NDL1	Q06568	189 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	IPK1	Q06667	281 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	CMS1	Q07897	291 aa	Known RBP	1.06	□□□□□ -2.24
YIR044C	YIR044C	YOL075C	Q08234	1294 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	SRO7	Q12038	1033 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	ATP16	Q12165	160 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	YDR061W	Q12298	539 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	FRE6	Q12473	712 aa		1.06	□□□□□ -2.24
YIR044C	YIR044C	RPL23A	P0CX41	137 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	RPL23B	P0CX42	137 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	RPS16A	P0CX51	143 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	RPS16B	P0CX52	143 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	PRY2	P36110	329 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	YSW1	P38280	609 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	SNL1	P40548	159 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	STB1	P42845	420 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	YJR030C	P47101	745 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	ASN2	P49090	572 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	KTR6	P54070	446 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	TPS1	Q00764	495 aa	Known RBP	1.05	□□□□□ -2.24
YIR044C	YIR044C	MRX11	Q03079	207 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	SMP3	Q04174	516 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	GAS2	Q06135	555 aa		1.05	□□□□□ -2.24
YIR044C	YIR044C	YDL114W	Q07530	308 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms