RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	CAP2	P13517	287 aa		2.54	□□□□□ -2
TFB1	YDR311W	CDC42	P19073	191 aa		2.54	□□□□□ -2
TFB1	YDR311W	GPI12	P23797	304 aa		2.54	□□□□□ -2
TFB1	YDR311W	YEF1	P32622	495 aa		2.54	□□□□□ -2
TFB1	YDR311W	SBE22	P38814	852 aa		2.54	□□□□□ -2
TFB1	YDR311W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
TFB1	YDR311W	IKS1	P47042	667 aa		2.54	□□□□□ -2
TFB1	YDR311W	STP1	Q00947	519 aa		2.54	□□□□□ -2
TFB1	YDR311W	YPR1	Q12458	312 aa		2.54	□□□□□ -2
TFB1	YDR311W	RGS2	Q99188	309 aa		2.54	□□□□□ -2
TFB1	YDR311W	POM152	P39685	1337 aa		2.53	□□□□□ -2
TFB1	YDR311W	RSR1	P13856	272 aa		2.53	□□□□□ -2
TFB1	YDR311W	CSM1	P25651	190 aa		2.53	□□□□□ -2
TFB1	YDR311W	VMA5	P31412	392 aa	Known RBP	2.53	□□□□□ -2
TFB1	YDR311W	IMP3	P32899	183 aa	Predicted RBP	2.53	□□□□□ -2
TFB1	YDR311W	MRP4	P32902	394 aa		2.53	□□□□□ -2
TFB1	YDR311W	MNS1	P32906	549 aa		2.53	□□□□□ -2
TFB1	YDR311W	IST2	P38250	946 aa		2.53	□□□□□ -2
TFB1	YDR311W	YBR137W	P38276	179 aa		2.53	□□□□□ -2
TFB1	YDR311W	PEX32	P38292	413 aa		2.53	□□□□□ -2
TFB1	YDR311W	RCY1	P39531	840 aa		2.53	□□□□□ -2
TFB1	YDR311W	YCH1	P42937	148 aa		2.53	□□□□□ -2
TFB1	YDR311W	LOH1	P47055	219 aa		2.53	□□□□□ -2
TFB1	YDR311W	TIM21	P53220	239 aa		2.53	□□□□□ -2
TFB1	YDR311W	LST7	P53237	242 aa		2.53	□□□□□ -2
TFB1	YDR311W	YNL260C	P53846	198 aa		2.53	□□□□□ -2
TFB1	YDR311W	HXT11	P54862	567 aa		2.53	□□□□□ -2
TFB1	YDR311W	RPM2	Q02773	1202 aa		2.53	□□□□□ -2
TFB1	YDR311W	BCH1	Q05029	724 aa		2.53	□□□□□ -2
TFB1	YDR311W	YLR173W	Q06247	608 aa		2.53	□□□□□ -2
TFB1	YDR311W	APC2	Q12440	853 aa		2.53	□□□□□ -2
TFB1	YDR311W	ARF2	P19146	181 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	DAL2	P25335	343 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	MKK1	P32490	508 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	PTR2	P32901	601 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	MTC4	P38335	694 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	RRP3	P38712	501 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	GEP4	P38812	185 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SEC9	P40357	651 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	XBP1	P40489	647 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	YIR016W	P40572	265 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SFH5	P47008	294 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	YJL118W	P47022	219 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SHS1	Q07657	551 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	MUM3	Q08750	479 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	RAX1	Q08760	435 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	YPL199C	Q08954	240 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	RBD2	Q12270	262 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	AHC1	Q12433	566 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
TFB1	YDR311W	POL30	P15873	258 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	PET123	P17558	318 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	MRPL8	P22353	238 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SPS22	P25380	463 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	ICL1	P28240	557 aa	Predicted RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	MSN4	P33749	630 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	CHK1	P38147	527 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	YHK8	P38776	514 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	PET100	P38958	111 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SLM1	P40485	686 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	OST1	P41543	476 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	PSA1	P41940	361 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	MDV1	P47025	714 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	LIA1	P47120	325 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	SSN8	P47821	323 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	CWC21	Q03375	135 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	HER2	Q03557	464 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	RIM13	Q03792	727 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	RVB1	Q03940	463 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	THI7	Q05998	598 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	SNX3	Q08826	162 aa	Known RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	PRP46	Q12417	451 aa	Predicted RBP	2.52	□□□□□ -2.01
TFB1	YDR311W	YNL162W-A	Q3E7A8	72 aa		2.52	□□□□□ -2.01
TFB1	YDR311W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.51	□□□□□ -2.01	not detected
TFB1	YDR311W	RPL5	P26321	297 aa	Known RBP	2.51	□□□□□ -2.01
TFB1	YDR311W	NTG1	P31378	399 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	NDC1	P32500	655 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	TRS65	P32893	560 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	TIR2	P33890	251 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	RIB5	P38145	238 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	YMR262W	P38430	313 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	DED81	P38707	554 aa	Known RBP	2.51	□□□□□ -2.01
TFB1	YDR311W	YHR045W	P38775	560 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	JLP2	P40206	208 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	INA22	P40576	216 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	TAF6	P53040	516 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	PXR1	P53335	271 aa	Predicted RBP	2.51	□□□□□ -2.01
TFB1	YDR311W	GOR1	P53839	350 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	SPP2	Q02521	185 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	YMR102C	Q03177	834 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	YMR181C	Q03231	154 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	CSM3	Q04659	317 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	RRN11	Q04712	507 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	BOP2	Q06150	570 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	PBP4	Q07362	185 aa	Known RBP	2.51	□□□□□ -2.01
TFB1	YDR311W	AYT1	Q12226	474 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	RUD3	Q12234	484 aa	Known RBP	2.51	□□□□□ -2.01
TFB1	YDR311W	SET6	Q12529	373 aa		2.51	□□□□□ -2.01
TFB1	YDR311W	RPL24A	P04449	155 aa	Known RBP	2.5	□□□□□ -2.01
TFB1	YDR311W	RAD7	P06779	565 aa		2.5	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms