RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RIM1P32445 135 aaKnown RBP2.09□□□□□ -2.07
SNU56YDR240C CYM1P32898 989 aa2.09□□□□□ -2.07
SNU56YDR240C TIR2P33890 251 aa2.09□□□□□ -2.07
SNU56YDR240C GPI16P38875 610 aa2.09□□□□□ -2.07
SNU56YDR240C KEG1P43614 200 aa2.09□□□□□ -2.07
SNU56YDR240C PIB2P53191 635 aa2.09□□□□□ -2.07
SNU56YDR240C REX2P54964 269 aaKnown RBP2.09□□□□□ -2.07
SNU56YDR240C PRP38Q00723 242 aaPredicted RBP2.09□□□□□ -2.07
SNU56YDR240C YHC1Q05900 231 aaKnown RBP2.09□□□□□ -2.07
SNU56YDR240C YLR456WQ06199 204 aa2.09□□□□□ -2.07
SNU56YDR240C RPL12AP0CX53 165 aaKnown RBP2.08□□□□□ -2.08
SNU56YDR240C RPL12BP0CX54 165 aa2.08□□□□□ -2.08
SNU56YDR240C MAS2P11914 482 aa2.08□□□□□ -2.08
SNU56YDR240C SLM5P25345 492 aaKnown RBP2.08□□□□□ -2.08
SNU56YDR240C IME2P32581 645 aa2.08□□□□□ -2.08
SNU56YDR240C DOA1P36037 715 aa2.08□□□□□ -2.08
SNU56YDR240C GEP4P38812 185 aa2.08□□□□□ -2.08
SNU56YDR240C FRT2P39734 528 aa2.08□□□□□ -2.08
SNU56YDR240C SPC19Q03954 165 aa2.08□□□□□ -2.08
SNU56YDR240C MCT1Q12283 360 aa2.08□□□□□ -2.08
SNU56YDR240C RNH203Q12338 110 aa2.08□□□□□ -2.08
SNU56YDR240C RPC53P25441 422 aa2.07□□□□□ -2.08
SNU56YDR240C PAC11P40960 533 aa2.07□□□□□ -2.08
SNU56YDR240C COQ5P49017 307 aa2.07□□□□□ -2.08
SNU56YDR240C TOS2P50078 622 aa2.07□□□□□ -2.08
SNU56YDR240C SEH1P53011 349 aaKnown RBP2.07□□□□□ -2.08
SNU56YDR240C VAC7P53950 1165 aa2.07□□□□□ -2.08
SNU56YDR240C RMT2Q03305 412 aa2.07□□□□□ -2.08
SNU56YDR240C YMR010WQ03687 405 aa2.07□□□□□ -2.08
SNU56YDR240C LDS1P31379 325 aa2.07□□□□□ -2.08
SNU56YDR240C DBF4P32325 704 aa2.07□□□□□ -2.08
SNU56YDR240C NRP1P32770 719 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SNU56YDR240C TOA1P32773 286 aa2.07□□□□□ -2.08
SNU56YDR240C TOA2P32774 122 aa2.07□□□□□ -2.08
SNU56YDR240C ECM34P38728 170 aa2.07□□□□□ -2.08
SNU56YDR240C CWC22P53333 577 aaKnown RBP2.07□□□□□ -2.08
SNU56YDR240C URC2Q04411 772 aa2.07□□□□□ -2.08
SNU56YDR240C YDR061WQ12298 539 aa2.07□□□□□ -2.08
SNU56YDR240C CHA1P25379 360 aaKnown RBP2.06□□□□□ -2.08
SNU56YDR240C PHO91P27514 894 aa2.06□□□□□ -2.08
SNU56YDR240C SWE1P32944 819 aa2.06□□□□□ -2.08
SNU56YDR240C QDR3P38227 689 aa2.06□□□□□ -2.08
SNU56YDR240C SHE3P38272 425 aaKnown RBP2.06□□□□□ -2.08
SNU56YDR240C FAD1P38913 306 aa2.06□□□□□ -2.08
SNU56YDR240C ASN2P49090 572 aaKnown RBP2.06□□□□□ -2.08
SNU56YDR240C YGR111WP53265 400 aa2.06□□□□□ -2.08
SNU56YDR240C YLR177WQ06251 628 aa2.06□□□□□ -2.08
SNU56YDR240C UAF30Q08747 228 aa2.06□□□□□ -2.08
SNU56YDR240C TIR4Q12218 487 aaPredicted RBP2.06□□□□□ -2.08
SNU56YDR240C APC2Q12440 853 aa2.06□□□□□ -2.08
SNU56YDR240C MDH1P17505 334 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SNU56YDR240C LTV1P34078 463 aa2.05□□□□□ -2.08
SNU56YDR240C ZIM17P42844 174 aa2.05□□□□□ -2.08
SNU56YDR240C PMT5P52867 743 aa2.05□□□□□ -2.08
SNU56YDR240C YDR115WQ04598 105 aa2.05□□□□□ -2.08
SNU56YDR240C NDL1Q06568 189 aa2.05□□□□□ -2.08
SNU56YDR240C YOL085CQ99345 113 aa2.05□□□□□ -2.08
SNU56YDR240C OPI3P05375 206 aa2.04□□□□□ -2.08
SNU56YDR240C ZIP1P31111 875 aa2.04□□□□□ -2.08
SNU56YDR240C PDC2P32896 925 aa2.04□□□□□ -2.08
SNU56YDR240C WSC4P38739 605 aa2.04□□□□□ -2.08
SNU56YDR240C YIR035CP40579 254 aa2.04□□□□□ -2.08
SNU56YDR240C SEC27P41811 889 aaKnown RBP2.04□□□□□ -2.08
SNU56YDR240C CIN2P46670 268 aa2.04□□□□□ -2.08
SNU56YDR240C DIA1P54005 336 aa2.04□□□□□ -2.08
SNU56YDR240C YDR541CQ03049 344 aa2.04□□□□□ -2.08
SNU56YDR240C ECM7Q06200 448 aa2.04□□□□□ -2.08
SNU56YDR240C YPR195CQ06594 109 aa2.04□□□□□ -2.08
SNU56YDR240C ASA1Q06822 443 aa2.04□□□□□ -2.08
SNU56YDR240C AAD15Q08361 143 aa2.04□□□□□ -2.08
SNU56YDR240C SRO7Q12038 1033 aa2.04□□□□□ -2.08
SNU56YDR240C PDE2P06776 526 aa2.03□□□□□ -2.08
SNU56YDR240C UNG1P12887 359 aa2.03□□□□□ -2.08
SNU56YDR240C EPT1P22140 391 aa2.03□□□□□ -2.08
SNU56YDR240C ANP1P32629 500 aa2.03□□□□□ -2.08
SNU56YDR240C PRY2P36110 329 aa2.03□□□□□ -2.08
SNU56YDR240C RCK2P38623 610 aa2.03□□□□□ -2.08
SNU56YDR240C FHL1P39521 936 aa2.03□□□□□ -2.08
SNU56YDR240C ABM1P47146 123 aa2.03□□□□□ -2.08
SNU56YDR240C VEL1P53058 206 aa2.03□□□□□ -2.08
SNU56YDR240C ROG1P53118 685 aa2.03□□□□□ -2.08
SNU56YDR240C RTT102P53330 157 aa2.03□□□□□ -2.08
SNU56YDR240C RNH201P53942 307 aa2.03□□□□□ -2.08
SNU56YDR240C ERO1Q03103 563 aa2.03□□□□□ -2.08
SNU56YDR240C VPS72Q03388 795 aa2.03□□□□□ -2.08
SNU56YDR240C FSH2Q05015 223 aa2.03□□□□□ -2.08
SNU56YDR240C NOP6Q07623 225 aaKnown RBP2.03□□□□□ -2.08
SNU56YDR240C LDS2Q08218 356 aa2.03□□□□□ -2.08
SNU56YDR240C DDC1Q08949 612 aa2.03□□□□□ -2.08
SNU56YDR240C HEM4P06174 275 aa2.02□□□□□ -2.09
SNU56YDR240C RNA1P11745 407 aaKnown RBP2.02□□□□□ -2.09
SNU56YDR240C RRP7P25368 297 aaPredicted RBP2.02□□□□□ -2.09
SNU56YDR240C RPL16AP26784 199 aaKnown RBP2.02□□□□□ -2.09
SNU56YDR240C MSP1P28737 362 aa2.02□□□□□ -2.09
SNU56YDR240C SPS19P32573 292 aaKnown RBP2.02□□□□□ -2.09
SNU56YDR240C YSC83P32792 385 aa2.02□□□□□ -2.09
SNU56YDR240C SMP1P38128 452 aa2.02□□□□□ -2.09
SNU56YDR240C CPR7P47103 393 aa2.02□□□□□ -2.09
SNU56YDR240C HST4P53688 370 aa2.02□□□□□ -2.09
SNU56YDR240C DCI1Q08558 271 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms