RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W COG2P53271 262 aa1.96□□□□□ -2.09
SIR4YDR227W TNA1P53322 534 aa1.96□□□□□ -2.09
SIR4YDR227W PLB2Q03674 706 aa1.96□□□□□ -2.09
SIR4YDR227W GIM5Q04493 163 aa1.96□□□□□ -2.09
SIR4YDR227W YPR078CQ06813 372 aa1.96□□□□□ -2.09
SIR4YDR227W DBP3P20447 523 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W SAG1P20840 650 aa1.96□□□□□ -2.1
SIR4YDR227W HXT2P23585 541 aa1.96□□□□□ -2.1
SIR4YDR227W MAK5P38112 773 aaPredicted RBP1.96□□□□□ -2.1
SIR4YDR227W PHO88P38264 188 aaPredicted RBP1.96□□□□□ -2.1
SIR4YDR227W YAL037WP39728 267 aa1.96□□□□□ -2.1
SIR4YDR227W MTW1P39731 289 aa1.96□□□□□ -2.1
SIR4YDR227W MET18P40469 1032 aa1.96□□□□□ -2.1
SIR4YDR227W RSM25P40496 264 aa1.96□□□□□ -2.1
SIR4YDR227W YIL001WP40560 513 aa1.96□□□□□ -2.1
SIR4YDR227W NAS6P50086 228 aa1.96□□□□□ -2.1
SIR4YDR227W SRT1Q03175 343 aa1.96□□□□□ -2.1
SIR4YDR227W ARP10Q04549 284 aa1.96□□□□□ -2.1
SIR4YDR227W GFD1Q04839 188 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W YLH47Q06493 454 aa1.96□□□□□ -2.1
SIR4YDR227W LDS2Q08218 356 aa1.96□□□□□ -2.1
SIR4YDR227W HRK1Q08732 759 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W FRE3Q08905 711 aa1.96□□□□□ -2.1
SIR4YDR227W PKH2Q12236 1081 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W APM4Q99186 491 aa1.96□□□□□ -2.1
SIR4YDR227W ARG81P05085 880 aa1.96□□□□□ -2.1
SIR4YDR227W MET3P08536 511 aa1.96□□□□□ -2.1
SIR4YDR227W SNF3P10870 884 aa1.96□□□□□ -2.1
SIR4YDR227W GLN3P18494 730 aa1.96□□□□□ -2.1
SIR4YDR227W SLY1P22213 666 aa1.96□□□□□ -2.1
SIR4YDR227W FPS1P23900 669 aa1.96□□□□□ -2.1
SIR4YDR227W RPL24BP24000 155 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W HXT3P32466 567 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W SWD2P36104 329 aaPredicted RBP1.96□□□□□ -2.1
SIR4YDR227W YGR210CP42942 411 aa1.96□□□□□ -2.1
SIR4YDR227W RPC17P47076 161 aa1.96□□□□□ -2.1
SIR4YDR227W HSH155P49955 971 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W FMS1P50264 508 aa1.96□□□□□ -2.1
SIR4YDR227W LSG1P53145 640 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W YMR010WQ03687 405 aa1.96□□□□□ -2.1
SIR4YDR227W ROT1Q03691 256 aa1.96□□□□□ -2.1
SIR4YDR227W PPN1Q04119 674 aa1.96□□□□□ -2.1
SIR4YDR227W SEG1Q04279 960 aa1.96□□□□□ -2.1
SIR4YDR227W YIL046W-AQ3E7Z4 54 aa1.96□□□□□ -2.1
SIR4YDR227W ATP6P00854 259 aa1.96□□□□□ -2.1
SIR4YDR227W RAD3P06839 778 aa1.96□□□□□ -2.1
SIR4YDR227W SPO12P17123 173 aa1.96□□□□□ -2.1
SIR4YDR227W UBA1P22515 1024 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W IMD2P38697 523 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W IAH1P41734 238 aa1.96□□□□□ -2.1
SIR4YDR227W RHO3Q00245 231 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W YPL080CQ02826 108 aa1.96□□□□□ -2.1
SIR4YDR227W RSN1Q03516 953 aa1.96□□□□□ -2.1
SIR4YDR227W YMR317WQ04893 1140 aa1.96□□□□□ -2.1
SIR4YDR227W YPR091CQ06833 770 aa1.96□□□□□ -2.1
SIR4YDR227W LOT6Q07923 191 aa1.96□□□□□ -2.1
SIR4YDR227W LEA1Q08963 238 aaPredicted RBP1.96□□□□□ -2.1
SIR4YDR227W ACM1Q08981 209 aa1.96□□□□□ -2.1
SIR4YDR227W YOR223WQ12015 292 aa1.96□□□□□ -2.1
SIR4YDR227W EFG1Q3E705 233 aaKnown RBP1.96□□□□□ -2.1
SIR4YDR227W COX2P00410 251 aa1.95□□□□□ -2.1
SIR4YDR227W SOF1P33750 489 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W AIM3P38266 947 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W TVP23P38962 199 aa1.95□□□□□ -2.1
SIR4YDR227W GUF1P46943 645 aa1.95□□□□□ -2.1
SIR4YDR227W PHO86P46956 311 aa1.95□□□□□ -2.1
SIR4YDR227W NBP1P52919 319 aaPredicted RBP1.95□□□□□ -2.1
SIR4YDR227W SNO1Q03144 224 aa1.95□□□□□ -2.1
SIR4YDR227W FRE5Q08908 694 aa1.95□□□□□ -2.1
SIR4YDR227W YPL150WQ12152 901 aa1.95□□□□□ -2.1
SIR4YDR227W RIF1P29539 1916 aa1.95□□□□□ -2.1
SIR4YDR227W IMA3P0CW40 589 aa1.95□□□□□ -2.1
SIR4YDR227W IMA4P0CW41 589 aa1.95□□□□□ -2.1
SIR4YDR227W PCT1P13259 424 aa1.95□□□□□ -2.1
SIR4YDR227W SAC7P17121 654 aa1.95□□□□□ -2.1
SIR4YDR227W SAR1P20606 190 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W PDE1P22434 369 aa1.95□□□□□ -2.1
SIR4YDR227W SNT1P25357 1226 aa1.95□□□□□ -2.1
SIR4YDR227W SRB5P32585 307 aa1.95□□□□□ -2.1
SIR4YDR227W COX13P32799 129 aa1.95□□□□□ -2.1
SIR4YDR227W ASC1P38011 319 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W MRX3P38172 270 aa1.95□□□□□ -2.1
SIR4YDR227W MET30P39014 640 aa1.95□□□□□ -2.1
SIR4YDR227W YER085CP40058 173 aa1.95□□□□□ -2.1
SIR4YDR227W SCC4P40090 624 aa1.95□□□□□ -2.1
SIR4YDR227W RGI2P40188 164 aa1.95□□□□□ -2.1
SIR4YDR227W YMR144WP40214 342 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W TDA10P42938 290 aa1.95□□□□□ -2.1
SIR4YDR227W YJR079WP47126 109 aa1.95□□□□□ -2.1
SIR4YDR227W TIM21P53220 239 aa1.95□□□□□ -2.1
SIR4YDR227W SPC98P53540 846 aa1.95□□□□□ -2.1
SIR4YDR227W NRM1P53718 249 aa1.95□□□□□ -2.1
SIR4YDR227W DBP6P53734 629 aaKnown RBP1.95□□□□□ -2.1
SIR4YDR227W ARK1P53974 638 aa1.95□□□□□ -2.1
SIR4YDR227W SPP2Q02521 185 aa1.95□□□□□ -2.1
SIR4YDR227W MUB1Q03162 620 aa1.95□□□□□ -2.1
SIR4YDR227W YET2Q04210 160 aa1.95□□□□□ -2.1
SIR4YDR227W GRX8Q05926 109 aa1.95□□□□□ -2.1
SIR4YDR227W SEC10Q06245 871 aa1.95□□□□□ -2.1
SIR4YDR227W MFG1Q07684 458 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms