RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C PET117Q02771 107 aa4.36□□□□□ -1.71
NUP42YDR192C YMR102CQ03177 834 aa4.36□□□□□ -1.71
NUP42YDR192C CCE1Q03702 353 aa4.36□□□□□ -1.71
NUP42YDR192C RPN9Q04062 393 aaKnown RBP4.36□□□□□ -1.71
NUP42YDR192C YDR278CQ05612 105 aa4.36□□□□□ -1.71
NUP42YDR192C SWC7Q06707 132 aa4.36□□□□□ -1.71
NUP42YDR192C GEP3Q08622 556 aa4.36□□□□□ -1.71
NUP42YDR192C YOL159C-AQ3E769 90 aa4.36□□□□□ -1.71
NUP42YDR192C RAD52P06778 471 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C YFL068WP0CX99 160 aa4.35□□□□□ -1.71
NUP42YDR192C YLL066W-AP0CY00 160 aa4.35□□□□□ -1.71
NUP42YDR192C YLL067W-AP0CY01 160 aa4.35□□□□□ -1.71
NUP42YDR192C RPL3P14126 387 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C YCR007CP25354 239 aa4.35□□□□□ -1.71
NUP42YDR192C SNT1P25357 1226 aa4.35□□□□□ -1.71
NUP42YDR192C RFS1P38234 210 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C ARC40P38328 384 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C SRP72P38688 640 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C YER034WP40022 185 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C YJL068CP40363 299 aa4.35□□□□□ -1.71
NUP42YDR192C BUD13P46947 266 aaPredicted RBP4.35□□□□□ -1.71
NUP42YDR192C GCD14P46959 383 aaPredicted RBP4.35□□□□□ -1.71
NUP42YDR192C ASG7P46993 209 aa4.35□□□□□ -1.71
NUP42YDR192C OCA1P50946 238 aaPredicted RBP4.35□□□□□ -1.71
NUP42YDR192C YGL108CP53139 140 aa4.35□□□□□ -1.71
NUP42YDR192C RMD9P53140 646 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C IMP4P53941 290 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C SAM50P53969 484 aa4.35□□□□□ -1.71
NUP42YDR192C YPL068CQ02749 293 aa4.35□□□□□ -1.71
NUP42YDR192C RTN1Q04947 295 aaKnown RBP4.35□□□□□ -1.71
NUP42YDR192C DIC1Q06143 298 aa4.35□□□□□ -1.71
NUP42YDR192C SEC10Q06245 871 aa4.35□□□□□ -1.71
NUP42YDR192C ISA2Q12425 185 aa4.35□□□□□ -1.71
NUP42YDR192C SCH9P11792 824 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C PMR1P13586 950 aa4.34□□□□□ -1.71
NUP42YDR192C MNE1P24720 663 aa4.34□□□□□ -1.71
NUP42YDR192C SPB1P25582 841 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C ACH1P32316 526 aa4.34□□□□□ -1.71
NUP42YDR192C AFG1P32317 509 aa4.34□□□□□ -1.71
NUP42YDR192C HXT3P32466 567 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C ECM15P35195 104 aa4.34□□□□□ -1.71
NUP42YDR192C RIM2P38127 377 aa4.34□□□□□ -1.71
NUP42YDR192C NTC20P38302 140 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C YBP1P38315 674 aa4.34□□□□□ -1.71
NUP42YDR192C URA8P38627 578 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C YHB1P39676 399 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C ATM1P40416 690 aa4.34□□□□□ -1.71
NUP42YDR192C YIL169CP40442 995 aa4.34□□□□□ -1.71
NUP42YDR192C YGR149WP48236 432 aa4.34□□□□□ -1.71
NUP42YDR192C TRF5P48561 642 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C MIG2P53035 382 aa4.34□□□□□ -1.71
NUP42YDR192C YGR250CP53316 781 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C NOP19P53317 196 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C BUD32P53323 261 aa4.34□□□□□ -1.71
NUP42YDR192C OGG1P53397 376 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C BIO4P53630 237 aa4.34□□□□□ -1.71
NUP42YDR192C SLM2P53955 656 aa4.34□□□□□ -1.71
NUP42YDR192C MPS1P54199 764 aa4.34□□□□□ -1.71
NUP42YDR192C KAP120Q02932 1032 aa4.34□□□□□ -1.71
NUP42YDR192C FMP42Q04991 504 aa4.34□□□□□ -1.71
NUP42YDR192C YMR034CQ05131 434 aaPredicted RBP4.34□□□□□ -1.71
NUP42YDR192C RRP45Q05636 305 aaKnown RBP4.34□□□□□ -1.71
NUP42YDR192C SNA4Q07549 140 aa4.34□□□□□ -1.71
NUP42YDR192C SRL1Q08673 210 aa4.34□□□□□ -1.71
NUP42YDR192C YOR012WQ12351 137 aa4.34□□□□□ -1.71
NUP42YDR192C GTT2Q12390 233 aa4.34□□□□□ -1.71
NUP42YDR192C SUC2P00724 532 aa4.33□□□□□ -1.72
NUP42YDR192C GPH1P06738 902 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C BAR1P12630 587 aa4.33□□□□□ -1.72
NUP42YDR192C SEC62P21825 274 aa4.33□□□□□ -1.72
NUP42YDR192C PEX34P25584 144 aa4.33□□□□□ -1.72
NUP42YDR192C ATP7P30902 174 aa4.33□□□□□ -1.72
NUP42YDR192C ERG1P32476 496 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C KAR9P32526 644 aa4.33□□□□□ -1.72
NUP42YDR192C VMA8P32610 256 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C COX13P32799 129 aa4.33□□□□□ -1.72
NUP42YDR192C CYM1P32898 989 aa4.33□□□□□ -1.72
NUP42YDR192C IMP3P32899 183 aaPredicted RBP4.33□□□□□ -1.72
NUP42YDR192C MSN2P33748 704 aa4.33□□□□□ -1.72
NUP42YDR192C TUL1P36096 758 aa4.33□□□□□ -1.72
NUP42YDR192C YBR056WP38081 501 aa4.33□□□□□ -1.72
NUP42YDR192C YBR032WP38223 100 aa4.33□□□□□ -1.72
NUP42YDR192C YBR062CP38239 180 aa4.33□□□□□ -1.72
NUP42YDR192C RIO2P40160 425 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C MOB1P40484 314 aa4.33□□□□□ -1.72
NUP42YDR192C DIM1P41819 318 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C YFR018CP43599 363 aa4.33□□□□□ -1.72
NUP42YDR192C EFM5P53200 248 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C GPI1P53306 609 aa4.33□□□□□ -1.72
NUP42YDR192C TDA7P53882 636 aaPredicted RBP4.33□□□□□ -1.72
NUP42YDR192C HER2Q03557 464 aa4.33□□□□□ -1.72
NUP42YDR192C TVP15Q03860 143 aa4.33□□□□□ -1.72
NUP42YDR192C FMP45Q07651 309 aa4.33□□□□□ -1.72
NUP42YDR192C YPL225WQ08971 146 aaKnown RBP4.33□□□□□ -1.72
NUP42YDR192C BSC1Q12140 328 aa4.33□□□□□ -1.72
NUP42YDR192C HSP42Q12329 375 aa4.33□□□□□ -1.72
NUP42YDR192C RIF1P29539 1916 aa4.33□□□□□ -1.72
NUP42YDR192C MOT1P32333 1867 aa4.32□□□□□ -1.72
NUP42YDR192C COX5AP00424 153 aa4.32□□□□□ -1.72
NUP42YDR192C CAR1P00812 333 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms