RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	VAM7	P32912	316 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	MRPS5	P33759	307 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	YKL070W	P36087	169 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	GPX2	P38143	162 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	RIB5	P38145	238 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	CHK1	P38147	527 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	HXT11	P54862	567 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	SNX3	Q08826	162 aa	Known RBP	4.77	□□□□□ -1.65
RAM1	YDL090C	DAP1	Q12091	152 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	DCP1	Q12517	231 aa	Predicted RBP	4.77	□□□□□ -1.65
RAM1	YDL090C	RRP12	Q12754	1228 aa	Known RBP	4.77	□□□□□ -1.65
RAM1	YDL090C	MLP2	P40457	1679 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	STE2	D6VTK4	431 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RAM1	YDL090C	SUP35	P05453	685 aa	Known RBP	4.76	□□□□□ -1.65
RAM1	YDL090C	RPL20A	P0CX23	172 aa	Known RBP	4.76	□□□□□ -1.65
RAM1	YDL090C	RPL20B	P0CX24	172 aa	Predicted RBP	4.76	□□□□□ -1.65
RAM1	YDL090C	YEF1	P32622	495 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
RAM1	YDL090C	MCR1	P36060	302 aa	Known RBP	4.76	□□□□□ -1.65
RAM1	YDL090C	SCS3	P53012	380 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	VOA1	P53262	265 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	TIM11	P81449	96 aa	Predicted RBP	4.76	□□□□□ -1.65
RAM1	YDL090C	YMR181C	Q03231	154 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	ERV41	Q04651	352 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	NAT4	Q04751	285 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	GAT3	Q07928	141 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	RRT8	Q08219	342 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	CEX1	Q12453	761 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	STU1	P38198	1513 aa		4.76	□□□□□ -1.65
RAM1	YDL090C	SPT6	P23615	1451 aa	Known RBP	4.75	□□□□□ -1.65
RAM1	YDL090C	ATR1	P13090	542 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	MSS116	P15424	664 aa	Known RBP	4.75	□□□□□ -1.65
RAM1	YDL090C	RAD23	P32628	398 aa	Known RBP	4.75	□□□□□ -1.65
RAM1	YDL090C	MIX23	P38162	196 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	ATG7	P38862	630 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	CCT4	P39078	528 aa	Known RBP	4.75	□□□□□ -1.65
RAM1	YDL090C	YAT2	P40017	923 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	YMR134W	P40207	237 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	CAF40	P53829	373 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	RRN5	Q02983	363 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	ERP1	Q05359	219 aa	Known RBP	4.75	□□□□□ -1.65
RAM1	YDL090C	YLH47	Q06493	454 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	APC5	Q08683	685 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	RAX1	Q08760	435 aa		4.75	□□□□□ -1.65
RAM1	YDL090C	CAR2	P07991	424 aa	Known RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	SAR1	P20606	190 aa	Known RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	FAR1	P21268	830 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	UTR1	P21373	530 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	MEK1	P24719	497 aa	Predicted RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	YUH1	P35127	236 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	GEP4	P38812	185 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	FET3	P38993	636 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	JLP2	P40206	208 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	BTT1	P40314	149 aa	Predicted RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	SEC9	P40357	651 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	CDC40	P40968	455 aa	Predicted RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	GTO1	P48239	356 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	MND1	P53102	219 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	GOR1	P53839	350 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	GRX3	Q03835	250 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	YMR317W	Q04893	1140 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	RLP24	Q07915	199 aa	Known RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	YOL075C	Q08234	1294 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	THP3	Q12049	470 aa	Known RBP	4.74	□□□□□ -1.65
RAM1	YDL090C	RGS2	Q99188	309 aa		4.74	□□□□□ -1.65
RAM1	YDL090C	RAD1	P06777	1100 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	MRPL8	P22353	238 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	TIR2	P33890	251 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	NAT2	P37293	288 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	PEX32	P38292	413 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	PEX18	P38855	283 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	RPH1	P39956	796 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	NAS6	P50086	228 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	YGR266W	P53326	701 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	BUR2	Q05949	395 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	SHS1	Q07657	551 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	AHC1	Q12433	566 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	SET6	Q12529	373 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	MYO4	P32492	1471 aa		4.73	□□□□□ -1.65
RAM1	YDL090C	HXT1	P32465	570 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	MNS1	P32906	549 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	RPT5	P33297	434 aa	Known RBP	4.72	□□□□□ -1.65
RAM1	YDL090C	MYO3	P36006	1272 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	MRPL37	P36532	105 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	YHK8	P38776	514 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	WSC2	P53832	503 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	TIP41	Q12199	356 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	LDB17	Q12342	491 aa		4.72	□□□□□ -1.65
RAM1	YDL090C	DET1	Q99288	334 aa	Known RBP	4.72	□□□□□ -1.65
RAM1	YDL090C	MYO2	P19524	1574 aa	Known RBP	4.72	□□□□□ -1.65
RAM1	YDL090C	PDR10	P51533	1564 aa		4.71	□□□□□ -1.66
RAM1	YDL090C	CFT1	Q06632	1357 aa	Known RBP	4.71	□□□□□ -1.66
RAM1	YDL090C	RPP0	P05317	312 aa	Known RBP	4.71	□□□□□ -1.66
RAM1	YDL090C	GDH1	P07262	454 aa	Known RBP	4.71	□□□□□ -1.66
RAM1	YDL090C	PHA2	P32452	334 aa		4.71	□□□□□ -1.66
RAM1	YDL090C	MUD1	P32605	298 aa	Known RBP	4.71	□□□□□ -1.66
RAM1	YDL090C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
RAM1	YDL090C	YKL162C	P36052	402 aa		4.71	□□□□□ -1.66
RAM1	YDL090C	IST2	P38250	946 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms