RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W BSC1Q12140 328 aa5.3□□□□□ -1.56
SHP1YBL058W BPH1P25356 2167 aa5.29□□□□□ -1.56
SHP1YBL058W CBP6P07253 162 aaPredicted RBP5.29□□□□□ -1.56
SHP1YBL058W UNG1P12887 359 aa5.29□□□□□ -1.56
SHP1YBL058W CDC34P14682 295 aa5.29□□□□□ -1.56
SHP1YBL058W KGD1P20967 1014 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W OAF3P36023 863 aa5.29□□□□□ -1.56
SHP1YBL058W TDP1P38319 544 aa5.29□□□□□ -1.56
SHP1YBL058W YGP1P38616 354 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W ANS1P38832 159 aa5.29□□□□□ -1.56
SHP1YBL058W PTH1P38876 190 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W YNL208WP40159 199 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W AYR1P40471 297 aa5.29□□□□□ -1.56
SHP1YBL058W REE1P40893 198 aa5.29□□□□□ -1.56
SHP1YBL058W BIT61P47041 543 aa5.29□□□□□ -1.56
SHP1YBL058W AAD10P47182 288 aa5.29□□□□□ -1.56
SHP1YBL058W LYS5P50113 272 aa5.29□□□□□ -1.56
SHP1YBL058W SOK2P53438 785 aaPredicted RBP5.29□□□□□ -1.56
SHP1YBL058W NCE101Q02820 53 aa5.29□□□□□ -1.56
SHP1YBL058W SDC1Q03323 175 aa5.29□□□□□ -1.56
SHP1YBL058W YDR249CQ03787 373 aa5.29□□□□□ -1.56
SHP1YBL058W TY1A-DR2Q03964 440 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W FAR8Q05040 523 aa5.29□□□□□ -1.56
SHP1YBL058W STE23Q06010 1027 aa5.29□□□□□ -1.56
SHP1YBL058W COS7Q07788 383 aa5.29□□□□□ -1.56
SHP1YBL058W HNT3Q08702 217 aa5.29□□□□□ -1.56
SHP1YBL058W NCE102Q12207 173 aaRIP-Chip data5.29□□□□□ -1.56not detected
SHP1YBL058W SNF8Q12483 233 aa5.29□□□□□ -1.56
SHP1YBL058W NOP58Q12499 511 aaKnown RBP5.29□□□□□ -1.56
SHP1YBL058W YKL018C-AQ3E7A7 99 aa5.29□□□□□ -1.56
SHP1YBL058W MET2P08465 486 aa5.28□□□□□ -1.56
SHP1YBL058W DMC1P25453 334 aa5.28□□□□□ -1.56
SHP1YBL058W RAD51P25454 400 aa5.28□□□□□ -1.56
SHP1YBL058W NGG1P32494 702 aa5.28□□□□□ -1.56
SHP1YBL058W YEF1P32622 495 aa5.28□□□□□ -1.56
SHP1YBL058W YOR062CP36025 268 aa5.28□□□□□ -1.56
SHP1YBL058W FRE2P36033 711 aa5.28□□□□□ -1.56
SHP1YBL058W SEN34P39707 275 aa5.28□□□□□ -1.56
SHP1YBL058W PIC2P40035 300 aa5.28□□□□□ -1.56
SHP1YBL058W ECL1P48235 211 aa5.28□□□□□ -1.56
SHP1YBL058W MTR3P48240 250 aaPredicted RBP5.28□□□□□ -1.56
SHP1YBL058W SWP1Q02795 286 aa5.28□□□□□ -1.56
SHP1YBL058W YMR010WQ03687 405 aa5.28□□□□□ -1.56
SHP1YBL058W YHC1Q05900 231 aaKnown RBP5.28□□□□□ -1.56
SHP1YBL058W MRP10O75012 95 aa5.27□□□□□ -1.57
SHP1YBL058W ARG81P05085 880 aa5.27□□□□□ -1.57
SHP1YBL058W MRP13P12686 339 aa5.27□□□□□ -1.57
SHP1YBL058W YAP1P19880 650 aaKnown RBP5.27□□□□□ -1.57
SHP1YBL058W AIM17P23180 465 aaKnown RBP5.27□□□□□ -1.57
SHP1YBL058W RPI1P23250 407 aaKnown RBP5.27□□□□□ -1.57
SHP1YBL058W RVS161P25343 265 aaKnown RBP5.27□□□□□ -1.57
SHP1YBL058W NPP1P25353 742 aa5.27□□□□□ -1.57
SHP1YBL058W NFS1P25374 497 aa5.27□□□□□ -1.57
SHP1YBL058W PPG1P32838 368 aa5.27□□□□□ -1.57
SHP1YBL058W ALG14P38242 237 aa5.27□□□□□ -1.57
SHP1YBL058W FAA2P39518 744 aa5.27□□□□□ -1.57
SHP1YBL058W YJL068CP40363 299 aa5.27□□□□□ -1.57
SHP1YBL058W YFR054CP43622 192 aa5.27□□□□□ -1.57
SHP1YBL058W YGR066CP53242 292 aa5.27□□□□□ -1.57
SHP1YBL058W MAL12P53341 584 aa5.27□□□□□ -1.57
SHP1YBL058W YNR068CP53754 272 aa5.27□□□□□ -1.57
SHP1YBL058W CUS2P53830 285 aaPredicted RBP5.27□□□□□ -1.57
SHP1YBL058W RHO5P53879 331 aaKnown RBP5.27□□□□□ -1.57
SHP1YBL058W BUR2Q05949 395 aa5.27□□□□□ -1.57
SHP1YBL058W YLR413WQ06689 675 aa5.27□□□□□ -1.57
SHP1YBL058W FMP40Q08968 688 aaPredicted RBP5.27□□□□□ -1.57
SHP1YBL058W FOL3Q12676 427 aaPredicted RBP5.27□□□□□ -1.57
SHP1YBL058W KSS1P14681 368 aa5.26□□□□□ -1.57
SHP1YBL058W CTR86P25355 563 aa5.26□□□□□ -1.57
SHP1YBL058W YCL049CP25577 312 aa5.26□□□□□ -1.57
SHP1YBL058W YPT7P32939 208 aa5.26□□□□□ -1.57
SHP1YBL058W YHL037CP38733 133 aa5.26□□□□□ -1.57
SHP1YBL058W NSG1P38837 291 aa5.26□□□□□ -1.57
SHP1YBL058W YER010CP40011 234 aa5.26□□□□□ -1.57
SHP1YBL058W ALG5P40350 334 aa5.26□□□□□ -1.57
SHP1YBL058W LAS21P40367 830 aa5.26□□□□□ -1.57
SHP1YBL058W PAC10P48363 199 aa5.26□□□□□ -1.57
SHP1YBL058W MOT3P54785 490 aaKnown RBP5.26□□□□□ -1.57
SHP1YBL058W YOL131WQ08270 108 aa5.26□□□□□ -1.57
SHP1YBL058W SGT1Q08446 395 aa5.26□□□□□ -1.57
SHP1YBL058W SWM1Q12379 170 aa5.26□□□□□ -1.57
SHP1YBL058W PFK27Q12471 397 aaPredicted RBP5.26□□□□□ -1.57
SHP1YBL058W NOT5Q12514 560 aaPredicted RBP5.26□□□□□ -1.57
SHP1YBL058W SAS5Q99314 248 aa5.26□□□□□ -1.57
SHP1YBL058W GAL3P13045 520 aa5.25□□□□□ -1.57
SHP1YBL058W CBS1P14066 229 aa5.25□□□□□ -1.57
SHP1YBL058W PDX1P16451 410 aa5.25□□□□□ -1.57
SHP1YBL058W NUP2P32499 720 aa5.25□□□□□ -1.57
SHP1YBL058W SSE1P32589 693 aaKnown RBP5.25□□□□□ -1.57
SHP1YBL058W VPS41P38959 992 aa5.25□□□□□ -1.57
SHP1YBL058W YJL193WP39542 402 aa5.25□□□□□ -1.57
SHP1YBL058W ECM10P39987 644 aa5.25□□□□□ -1.57
SHP1YBL058W GAT2P40209 560 aa5.25□□□□□ -1.57
SHP1YBL058W YDR476CQ03362 224 aa5.25□□□□□ -1.57
SHP1YBL058W NAT4Q04751 285 aa5.25□□□□□ -1.57
SHP1YBL058W RSA1Q08932 381 aa5.25□□□□□ -1.57
SHP1YBL058W YDL211CQ12121 372 aa5.25□□□□□ -1.57
SHP1YBL058W NCA2Q12374 616 aa5.25□□□□□ -1.57
SHP1YBL058W RPS21BQ3E754 87 aaKnown RBP5.25□□□□□ -1.57
SHP1YBL058W CAR1P00812 333 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms