RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SMTNP53814 917 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 ACTR2P61160 394 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 UBXN1Q04323 297 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
PHGDH-215ENST00000641371 CCDC144BQ3MJ40 725 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 METTL7BQ6UX53 244 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 DLK2Q6UY11 383 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 MYCT1Q8N699 235 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 CACTINQ8WUQ7 758 aaKnown RBP10.73□□□□□ -0.69
PHGDH-215ENST00000641371 SCFD1Q8WVM8 642 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 KCNN1Q92952 543 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 ERGIC2Q96RQ1 377 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
PHGDH-215ENST00000641371 EDEM3Q9BZQ6 932 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 INTS13Q9NVM9 706 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
PHGDH-215ENST00000641371 EXOC7Q9UPT5 735 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 DAAM1Q9Y4D1 1078 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 IGSF9BQ9UPX0 1349 aa10.73□□□□□ -0.69
PHGDH-215ENST00000641371 PLXNB2O15031 1838 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ATP9AO75110 1047 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 RGS20O76081 388 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 CCNE2O96020 404 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 PLS3P13797 630 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 TBC1D8BQ0IIM8 1120 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 TTLL4Q14679 1199 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 CCDC40Q4G0X9 1142 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 VWA3BQ502W6 1294 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 XKR9Q5GH70 373 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ODR4Q5SWX8 454 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 LRRC55Q6ZSA7 311 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ZNF720Q7Z2F6 126 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 FRMD5Q7Z6J6 570 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 IRF2BP1Q8IU81 584 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 AFAP1L1Q8TED9 768 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 SEPT1Q8WYJ6 367 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 UIMC1Q96RL1 719 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 JPH2Q9BR39 696 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 VPS16Q9H269 839 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 KCNF1Q9H3M0 494 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 VTA1Q9NP79 307 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 NRBP2Q9NSY0 501 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 TAB2Q9NYJ8 693 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 PKD2L1Q9P0L9 805 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-215ENST00000641371 GABBR1Q9UBS5 961 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 NRBP1Q9UHY1 535 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 ARID2Q68CP9 1835 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 PLXNA1Q9UIW2 1896 aa10.72□□□□□ -0.69
PHGDH-215ENST00000641371 IGKV6D-21A0A0A0MT36 114 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 A0A1W2PQJ5 194 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 BACH1O14867 736 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 HIP1RO75146 1068 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 HOXC6P09630 235 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 RFC5P40937 340 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 HUNKP57058 714 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 CCZ1BP86790 482 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-215ENST00000641371 ENPEPQ07075 957 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 DMP1Q13316 513 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-215ENST00000641371 ADAM9Q13443 819 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 PPP2R5AQ15172 486 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 FMNL3Q8IVF7 1028 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 C12orf56Q8IXR9 622 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 SCFD2Q8WU76 684 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 BRI3BPQ8WY22 251 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 HHIPL1Q96JK4 782 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 NUCKS1Q9H1E3 243 aaKnown RBP10.71□□□□□ -0.69
PHGDH-215ENST00000641371 TMX1Q9H3N1 280 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 NDST4Q9H3R1 872 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 AZI2Q9H6S1 392 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 TXNRD2Q9NNW7 524 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 ZNF302Q9NR11 478 aa10.71□□□□□ -0.69
PHGDH-215ENST00000641371 MAFBQ9Y5Q3 323 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-215ENST00000641371 NPHP3-ACAD11A0A0J9YXS1 232 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 PES1O00541 588 aaKnown RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 NKRFO15226 690 aaKnown RBP eCLIP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 MAPK13O15264 365 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ZSCAN12O43309 604 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 MFAP3LO75121 409 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 PPP1R37O75864 691 aa10.7□□□□□ -0.7
PHGDH-215ENST00000641371 FARP2O94887 1054 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 ITGBL1O95965 494 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-215ENST00000641371 UBA1P22314 1058 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms