RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 NLRX1Q86UT6 975 aa16.84■□□□□ 0.29
KCNC1-213ENST00000640909 GLG1Q92896 1179 aa16.84■□□□□ 0.29
KCNC1-213ENST00000640909 FAM49AQ9H0Q0 323 aaPredicted RBP16.84■□□□□ 0.29
KCNC1-213ENST00000640909 ERVK-5Q9HDB9 667 aa16.84■□□□□ 0.29
KCNC1-213ENST00000640909 TMEM161AQ9NX61 479 aa16.84■□□□□ 0.29
KCNC1-213ENST00000640909 EP300Q09472 2414 aaPredicted RBP16.84■□□□□ 0.29
KCNC1-213ENST00000640909 DENND3A2RUS2 1198 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 C9IYK1 514 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 KLRF2D3W0D1 207 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 HOXA2O43364 376 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 MARK3P27448 753 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 PDE4AP27815 886 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 BMS1Q14692 1282 aaKnown RBP16.83■□□□□ 0.28
KCNC1-213ENST00000640909 SIX5Q8N196 739 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 MRPL43Q8N983 215 aaKnown RBP16.83■□□□□ 0.28
KCNC1-213ENST00000640909 FBXL21Q9UKT6 434 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 TELO2Q9Y4R8 837 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 CFAP47Q6ZTR5 3102 aa16.83■□□□□ 0.28
KCNC1-213ENST00000640909 SMIM35A0A1B0GVV1 85 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 IGBP1P78318 339 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 KRT76Q01546 638 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 NFX1Q12986 1120 aaKnown RBP16.82■□□□□ 0.28
KCNC1-213ENST00000640909 FAM102BQ5T8I3 360 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 OTOP3Q7RTS5 596 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 LRRC43Q8N309 656 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
KCNC1-213ENST00000640909 GPRASP2Q96D09 838 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 ZNF558Q96NG5 402 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 TMEM117Q9H0C3 514 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 ATP6V0A4Q9HBG4 840 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 WNT16Q9UBV4 365 aa16.82■□□□□ 0.28
KCNC1-213ENST00000640909 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 GSTTP1A0A1W2PQM5 241 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 ZNF213O14771 459 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 INSRRP14616 1297 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 KCNA2P16389 499 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
KCNC1-213ENST00000640909 TBC1D8BQ0IIM8 1120 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 TMEM62Q0P6H9 643 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 ST3GAL2Q16842 350 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 RSPO4Q2I0M5 234 aaPredicted RBP16.81■□□□□ 0.28
KCNC1-213ENST00000640909 KIAA0319Q5VV43 1072 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 ADAM2Q99965 735 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 IGSF9Q9P2J2 1179 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 HCSTQ9UBK5 93 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 R4GN57 208 aa16.81■□□□□ 0.28
KCNC1-213ENST00000640909 SALL3Q9BXA9 1300 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
KCNC1-213ENST00000640909 GPR182O15218 404 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 MGEA5O60502 916 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 CLASP2O75122 1294 aaKnown RBP16.8■□□□□ 0.28
KCNC1-213ENST00000640909 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 FAM189BP81408 668 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 GIT2Q14161 759 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 RARS2Q5T160 578 aaKnown RBP16.8■□□□□ 0.28
KCNC1-213ENST00000640909 CCDC149Q6ZUS6 474 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
KCNC1-213ENST00000640909 RIOX1Q9H6W3 641 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 SPG21Q9NZD8 308 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 OTOGLQ3ZCN5 2332 aa16.8■□□□□ 0.28
KCNC1-213ENST00000640909 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 TMEM266Q2M3C6 531 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 IFIT1BQ5T764 474 aaKnown RBP16.79■□□□□ 0.28
KCNC1-213ENST00000640909 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
KCNC1-213ENST00000640909 UBAC1Q9BSL1 405 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 KCNK12Q9HB15 430 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 IRAK3Q9Y616 596 aa16.79■□□□□ 0.28
KCNC1-213ENST00000640909 CEP250Q9BV73 2442 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 PNMA6FA0A0J9YX94 578 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 B4E1Z4 1266 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 PIK3CDO00329 1044 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 MAFGO15525 162 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 NONOQ15233 471 aaKnown RBP eCLIP16.78■□□□□ 0.28
KCNC1-213ENST00000640909 KRT23Q9C075 422 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 AZI2Q9H6S1 392 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 ZSWIM5Q9P217 1185 aa16.78■□□□□ 0.28
KCNC1-213ENST00000640909 ACACBO00763 2458 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 TPRP12270 2363 aaKnown RBP16.77■□□□□ 0.28
KCNC1-213ENST00000640909 PRR5-ARHGAP8B1AHC4 643 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 ATP9AO75110 1047 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 WEE2P0C1S8 567 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 SP9P0CG40 484 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 FGFR1P11362 822 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
KCNC1-213ENST00000640909 RFX1P22670 979 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 ARHGAP8P85298 464 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 ABI1Q8IZP0 508 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 SUMF1Q8NBK3 374 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 RSPH1Q8WYR4 309 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 CUL5Q93034 780 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 ZBTB10Q96DT7 871 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 CASD1Q96PB1 797 aa16.77■□□□□ 0.28
KCNC1-213ENST00000640909 PIGSQ96S52 555 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms