RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 MTUS1Q9ULD2 1270 aa13.39□□□□□ -0.27
ERGIC3-220ENST00000640748 LGR5O75473 907 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 SYKP43405 635 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 ADCY7P51828 1080 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 IKBKEQ14164 716 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 SHC4Q6S5L8 630 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 TIGD1Q96MW7 591 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 C1QTNF1Q9BXJ1 281 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 GLT8D2Q9H1C3 349 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 CD320Q9NPF0 282 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 HPSEQ9Y251 543 aa13.38□□□□□ -0.27
ERGIC3-220ENST00000640748 ADAMTS3O15072 1205 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 EFCAB14O75071 495 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 ZNF202O95125 648 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 TGFB3P10600 412 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 PLA2G5P39877 138 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 MRPS9P82933 396 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 CKAP2LQ8IYA6 745 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 SAMD3Q8N6K7 520 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 C11orf16Q9NQ32 467 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 TELO2Q9Y4R8 837 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 FRMPD4Q14CM0 1322 aa13.37□□□□□ -0.27
ERGIC3-220ENST00000640748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 RSPH10B2B2RC85 870 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 LGALS2P05162 132 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 RSPH10BP0C881 870 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 THPOP40225 353 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 TYRO3Q06418 890 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 PTGDRQ13258 359 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 LRFN3Q9BTN0 628 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
ERGIC3-220ENST00000640748 SIP14410 1827 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 H3BRB1 525 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 WNT7AO00755 349 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 TREHO43280 583 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 CCND2P30279 289 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 MCM7P33993 719 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 TRAF1Q13077 416 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 INF2Q27J81 1249 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 CUL5Q93034 780 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 ATP6V0A1Q93050 837 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 INPP4AQ96PE3 977 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 CSRNP2Q9H175 543 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 KCNH3Q9ULD8 1083 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 INSL6Q9Y581 213 aa13.35□□□□□ -0.27
ERGIC3-220ENST00000640748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 C17orf102A2RUQ5 167 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 SPATA31C2B4DYI2 1134 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 LAD1O00515 517 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 ICAM3P32942 547 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 ADAM17P78536 824 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 GRIN1Q05586 938 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 NEK8Q86SG6 692 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 GPR20Q99678 358 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 MLXIPQ9HAP2 919 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 MICAL3Q7RTP6 2002 aa13.34□□□□□ -0.27
ERGIC3-220ENST00000640748 CAVIN2O95810 425 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 AMHP03971 560 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 CTSHP09668 335 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 STX1AQ16623 288 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms