RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KIAA0754O94854 1291 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 NR3C1P04150 777 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 SPATA31C1P0DKV0 1188 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 DDR1Q08345 913 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 DPY19L2P1Q6NXN4 242 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 CDC42EP5Q6NZY7 148 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 OTUD6BQ8N6M0 293 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 LRRC57Q8N9N7 239 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 EDRF1Q3B7T1 1238 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 ZC2HC1CQ53FD0 456 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 ZNF473Q8WTR7 871 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 FBXL5Q9UKA1 691 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 NR2E1Q9Y466 385 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 PLIN4Q96Q06 1357 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 PGRMC1O00264 195 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 RGL2O15211 777 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 GDF11O95390 407 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 ADRA2BP18089 450 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 PTGISQ16647 500 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 SLFN13Q68D06 897 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 GLYCTKQ8IVS8 523 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 CCT8L2Q96SF2 557 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 ISCUQ9H1K1 167 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 EPN3Q9H201 632 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 KCNQ5Q9NR82 932 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 TMEM59LQ9UK28 342 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 COL24A1Q17RW2 1714 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 DCDC2CA8MYV0 355 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 DDX3XO00571 662 aaKnown RBP eCLIP18.05■□□□□ 0.482e-18■■□□□ 14.2
HNRNPU-228ENST00000640306 FLOT1O75955 427 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 NMT1P30419 496 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 MDH1P40925 334 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 SPIRE1Q08AE8 756 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 ITGB3BPQ13352 177 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 COG2Q14746 738 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 TRIM51Q9BSJ1 452 aa18.05■□□□□ 0.48
HNRNPU-228ENST00000640306 GCOM1H8Y6P7 765 aaPredicted RBP18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 H2AFZP0C0S5 128 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 MYZAPP0CAP1 466 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 HSPA9P38646 679 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 IFT88Q13099 833 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 CTTNQ14247 550 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 EPHA7Q15375 998 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 H2AFVQ71UI9 128 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 NLRP14Q86W24 1093 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 MREGQ8N565 214 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 ETNPPLQ8TBG4 499 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 SLC35C1Q96A29 364 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 ASTN1O14525 1302 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 UBXN2AP68543 259 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 FRMD5Q7Z6J6 570 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 RDH13Q8NBN7 331 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 SIX2Q9NPC8 291 aa18.04■□□□□ 0.48
HNRNPU-228ENST00000640306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.486e-7■■■■■ 32.3
HNRNPU-228ENST00000640306 FRMD3A2A2Y4 597 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 EML1O00423 815 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 TBCAO75347 108 aaKnown RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.482e-11■■■■□ 22.2
HNRNPU-228ENST00000640306 ZNF211Q13398 564 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 CRY2Q49AN0 593 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 COL23A1Q86Y22 540 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 SPICE1Q8N0Z3 855 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.486e-10■■■□□ 15.8
HNRNPU-228ENST00000640306 G3V3G9 751 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 CALUO43852 315 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 ZNF76P36508 570 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 GALCP54803 685 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 PLS1Q14651 629 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 DCAF8Q5TAQ9 597 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 SLFN12Q8IYM2 578 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 ZC3H12CQ9C0D7 883 aaKnown RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 TMBIM4Q9HC24 238 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 CHORDC1Q9UHD1 332 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 TRAF3IP3Q9Y228 551 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
HNRNPU-228ENST00000640306 SPDYE3A6NKU9 549 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 CPP00450 1065 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 FGGP02679 453 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 ZNF844Q08AG5 666 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 B4GALNT4Q76KP1 1039 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 SYT2Q8N9I0 419 aaPredicted RBP18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 PBKQ96KB5 322 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 NOVA2Q9UNW9 492 aaKnown RBP18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 EVI5O60447 810 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 TRIM49P0CI25 452 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 TRIM49CP0CI26 452 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 HNRNPH1P31943 449 aaKnown RBP18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 CYP2J2P51589 502 aa18.02■□□□□ 0.48
HNRNPU-228ENST00000640306 ARHGAP44Q17R89 818 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms