RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PALM2Q8IXS6 379 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 ZDHHC5Q9C0B5 715 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 OR10A5Q9H207 317 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 DEF6Q9H4E7 631 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 ASLP04424 464 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 SDHAP31040 664 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 STILQ15468 1287 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 PIK3R6Q5UE93 754 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 KANK2Q63ZY3 851 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 LARP4Q71RC2 724 aaKnown RBP eCLIP7.18□□□□□ -1.26
CCDC7-216ENST00000640058 GIMAP8Q8ND71 665 aaPredicted RBP7.18□□□□□ -1.26
CCDC7-216ENST00000640058 DVL3Q92997 716 aaPredicted RBP7.18□□□□□ -1.26
CCDC7-216ENST00000640058 NEIL1Q96FI4 390 aaPredicted RBP7.18□□□□□ -1.26
CCDC7-216ENST00000640058 BORCS6Q96GS4 357 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 SEC61A2Q9H9S3 476 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 TMEM260Q9NX78 707 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 ASB1Q9Y576 335 aa7.18□□□□□ -1.26
CCDC7-216ENST00000640058 B4E1Z4 1266 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 MECP2P51608 486 aaKnown RBP7.17□□□□□ -1.26
CCDC7-216ENST00000640058 STAT5BP51692 787 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 KIF11P52732 1056 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC7-216ENST00000640058 MOGSQ13724 837 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 TBR1Q16650 682 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 ZMAT1Q5H9K5 638 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 CXXC5Q7LFL8 322 aaKnown RBP7.17□□□□□ -1.26
CCDC7-216ENST00000640058 OTOP1Q7RTM1 612 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 FILIP1Q7Z7B0 1213 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 TAX1BP1Q86VP1 789 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 CHST14Q8NCH0 376 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 CD248Q9HCU0 757 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 FBXO10Q9UK96 956 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 NR2E1Q9Y466 385 aa7.17□□□□□ -1.26
CCDC7-216ENST00000640058 A0A0G2JNJ9 132 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 PTPDC1A2A3K4 754 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 GOLGA6L22H0YM25 854 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 DVL2O14641 736 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 JMJD7P0C870 316 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 RAC3P60763 192 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 PCOLCEQ15113 449 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 DNERQ8NFT8 737 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 RNPC3Q96LT9 517 aaKnown RBP7.16□□□□□ -1.26
CCDC7-216ENST00000640058 DPYSL5Q9BPU6 564 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 KLC2Q9H0B6 622 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 CABP5Q9NP86 173 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 Q9UFV3 132 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 MAGEL2Q9UJ55 1249 aa7.16□□□□□ -1.26
CCDC7-216ENST00000640058 TRAF5O00463 557 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 FOXS1O43638 330 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 ZNF623O75123 536 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 ARHGAP44Q17R89 818 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 CDCA2Q69YH5 1023 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-216ENST00000640058 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 GRAMD4Q6IC98 578 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 CC2D1AQ6P1N0 951 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-216ENST00000640058 RTN4RL1Q86UN2 441 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-216ENST00000640058 RTKN2Q8IZC4 609 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 Q8TCH9 128 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 CALML6Q8TD86 181 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 FOXRED1Q96CU9 486 aaPredicted RBP7.15□□□□□ -1.26
CCDC7-216ENST00000640058 SCYL1Q96KG9 808 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 WWC2-AS2Q96NR7 200 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 C1QTNF3Q9BXJ4 246 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 C12orf65Q9H3J6 166 aaKnown RBP7.15□□□□□ -1.26
CCDC7-216ENST00000640058 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 FAM184BQ9ULE4 1060 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 MYRFQ9Y2G1 1151 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 TCAF1Q9Y4C2 921 aa7.15□□□□□ -1.26
CCDC7-216ENST00000640058 PATE3B3GLJ2 98 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 CDC14BO60729 498 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
CCDC7-216ENST00000640058 MRE11P49959 708 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 MEOX1P50221 254 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 ALDH6A1Q02252 535 aaKnown RBP7.14□□□□□ -1.27
CCDC7-216ENST00000640058 EIF4HQ15056 248 aaKnown RBP7.14□□□□□ -1.27
CCDC7-216ENST00000640058 CDSNQ15517 529 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 AGBL4Q5VU57 503 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 SH3RF3Q8TEJ3 882 aaPredicted RBP7.14□□□□□ -1.27
CCDC7-216ENST00000640058 OAZ3Q9UMX2 235 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 ZFR2Q9UPR6 939 aaKnown RBP7.14□□□□□ -1.27
CCDC7-216ENST00000640058 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
CCDC7-216ENST00000640058 H7C1D1 291 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 ARHGAP6O43182 974 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 APEX1P27695 318 aaKnown RBP7.13□□□□□ -1.27
CCDC7-216ENST00000640058 FLT3P36888 993 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 SELENOPP49908 381 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 UBE2R2Q712K3 238 aaPredicted RBP7.13□□□□□ -1.27
CCDC7-216ENST00000640058 SPRED1Q7Z699 444 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 KIAA1958Q8N8K9 716 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 OR14K1Q8NGZ2 314 aa7.13□□□□□ -1.27
CCDC7-216ENST00000640058 CBX4O00257 560 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 MATN2O00339 956 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 MATN3O15232 486 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 KPNA6O60684 536 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 SLC9A1P19634 815 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 CR2P20023 1033 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 RGS3P49796 1198 aa7.12□□□□□ -1.27
CCDC7-216ENST00000640058 SLC6A3Q01959 620 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms