RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 CEP350Q5VT06 3117 aa6.46□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNFX1Q9P2E3 1918 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 RRN3P2A6NIE6 340 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 SFI1A8K8P3 1242 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 EVI5O60447 810 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 RPA1P27694 616 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 THPOP40225 353 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 RTP1P59025 263 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 EFCAB12Q6NXP0 572 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 PADI6Q6TGC4 694 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 NLRP7Q8WX94 980 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 BBXQ8WY36 941 aaPredicted RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 IFT74Q96LB3 600 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 TSEN34Q9BSV6 310 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 HTATIP2Q9BUP3 242 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 BLZF1Q9H2G9 400 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 TRMT13Q9NUP7 481 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 TBC1D7Q9P0N9 293 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 OGDHLQ9ULD0 1010 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ZMYND8Q9ULU4 1186 aaPredicted RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 LRRIQ4A6NIV6 560 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 TRIM60Q495X7 471 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 SHC4Q6S5L8 630 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 RHPN2Q8IUC4 686 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 LARP4BQ92615 738 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ARVCFO00192 962 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNF862O60290 1169 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 CLSTN1O94985 981 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 RAG1P15918 1043 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 SYN1P17600 705 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 NDUFA8P51970 172 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 NFX1Q12986 1120 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNF484Q5JVG2 852 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ISM2Q6H9L7 571 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 PLPPR4Q7Z2D5 763 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 MYCT1Q8N699 235 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 KLHDC9Q8NEP7 349 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 DNAJB3Q8WWF6 145 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 PCYT2Q99447 389 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 JPH2Q9BR39 696 aaPredicted RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 POLR3CQ9BUI4 534 aaPredicted RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 UPF3AQ9H1J1 476 aaKnown RBP6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 ATP6V0A4Q9HBG4 840 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 CYP26B1Q9NR63 512 aa6.45□□□□□ -1.38
HNRNPU-220ENST00000639667 TREHO43280 583 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 VTNP04004 478 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 CMA1P23946 247 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 SLC26A2P50443 739 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 CCL23P55773 120 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 UBE2HP62256 183 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 GRB10Q13322 594 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 NFRKBQ6P4R8 1299 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 C4orf19Q8IY42 314 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 GRAMD1CQ8IYS0 662 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 IGSF22Q8N9C0 903 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 MTRQ99707 1265 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 LBHD1Q9BQE6 289 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 PYM1Q9BRP8 204 aaKnown RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 C16orf70Q9BSU1 422 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 GZF1Q9H116 711 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 DACT1Q9NYF0 836 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 SUCLA2Q9P2R7 463 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 A0A0G2JMZ2 1700 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 NPHP3-ACAD11A0A0J9YXS1 232 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNF202O95125 648 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 MCM4P33991 863 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 DDIT3P35638 169 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 EMC2Q15006 297 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 SLC39A5Q6ZMH5 540 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 CREBRFQ8IUR6 639 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 DEPTORQ8TB45 409 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 KAT2BQ92831 832 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 EMID1Q96A84 441 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 BICD1Q96G01 975 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 LRRC27Q9C0I9 530 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 POLR3FQ9H1D9 316 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 PHF24Q9UPV7 400 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 INO80B-WBP1J3KQ70 363 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 BIN1O00499 593 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 MAGEB2O15479 319 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 EYA4O95677 639 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 ECM1Q16610 540 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 HERC4Q5GLZ8 1057 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 GDF6Q6KF10 455 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 DEFB128Q7Z7B8 93 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 CCDC155Q8N6L0 562 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNF579Q8NAF0 562 aaKnown RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 PSPC1Q8WXF1 523 aaKnown RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 RAD54LQ92698 747 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 INO80BQ9C086 356 aaPredicted RBP6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 ANKEF1Q9NU02 776 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 PCDH10Q9P2E7 1040 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 NR2E3Q9Y5X4 410 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 NRCAMQ92823 1304 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 THSD7BQ9C0I4 1608 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 LGR5O75473 907 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 F2P00734 622 aa6.44□□□□□ -1.38
HNRNPU-220ENST00000639667 SPATA31C1P0DKV0 1188 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms