RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 KLF18A0A0U1RQI7 1052 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 MAGEA13PA6NCF6 341 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 TRIM43BA6NCK2 446 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 HOXB7P09629 217 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 PEX5P50542 639 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 TDRD12Q587J7 1177 aaKnown RBP7.71□□□□□ -1.17
NECAP1-213ENST00000638883 GET4Q7L5D6 327 aaPredicted RBP7.71□□□□□ -1.17
NECAP1-213ENST00000638883 HS2ST1Q7LGA3 356 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 TMCO5AQ8N6Q1 288 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 FAM133AQ8N9E0 248 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 TRIM31Q9BZY9 425 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 GJB4Q9NTQ9 266 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 ABCF3Q9NUQ8 709 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 SUN2Q9UH99 717 aa7.71□□□□□ -1.17
NECAP1-213ENST00000638883 IFIT3O14879 490 aaKnown RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ATG7O95352 703 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 MOCS3O95396 460 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 CALB2P22676 271 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 BPIFB4P59827 614 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 RASSF7Q02833 373 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 DHX9Q08211 1270 aaKnown RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ITIH4Q14624 930 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 NCCRP1Q6ZVX7 275 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 SMYD4Q8IYR2 804 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 LRRC34Q8IZ02 419 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 TTC5Q8N0Z6 440 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 SMCR8Q8TEV9 937 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 RBM12Q9NTZ6 932 aaKnown RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ADAM22Q9P0K1 906 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 LRWD1Q9UFC0 647 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 CARMIL3Q8ND23 1372 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ZSCAN5CA6NGD5 496 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 SMAPO00193 183 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 CCDC166P0CW27 439 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 TUBP50607 506 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 DMPKQ09013 629 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 UBE4AQ14139 1066 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ST13P4Q8IZP2 240 aaPredicted RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 PIGOQ8TEQ8 1089 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 CATSPER2Q96P56 530 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 FAM192AQ9GZU8 254 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ADD3Q9UEY8 706 aaKnown RBP7.71□□□□□ -1.18
NECAP1-213ENST00000638883 NUB1Q9Y5A7 615 aa7.71□□□□□ -1.18
NECAP1-213ENST00000638883 ATP9AO75110 1047 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 CHN1P15882 459 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 DRD4P21917 467 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 TMED10P49755 219 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 RASSF2P50749 326 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 COPB1P53618 953 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ADARP55265 1226 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 HAUS3Q68CZ6 603 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 COPS6Q7L5N1 327 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ZNF554Q86TJ5 538 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 NME8Q8N427 588 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 CDK5RAP3Q96JB5 506 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 TXLNGQ9NUQ3 528 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 LRCH1Q9Y2L9 728 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 BUB1O43683 1085 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 GLI1P08151 1106 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ZNF18P17022 549 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 FUT4P22083 530 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 CCNFP41002 786 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 MAGEA1P43355 309 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 SESTD1Q86VW0 696 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ZNF496Q96IT1 587 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 OLFM3Q96PB7 478 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 BRD8Q9H0E9 1235 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 STMN4Q9H169 189 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 RNPEPL1Q9HAU8 725 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 PNMA2Q9UL42 364 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 DUSP10Q9Y6W6 482 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 NEURL1BA8MQ27 555 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 CYP27B1O15528 508 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 NCK2O43639 380 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 IGBP1P78318 339 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 CYLC2Q14093 348 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 FAM98CQ17RN3 349 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 SGSM1Q2NKQ1 1148 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 KLC3Q6P597 504 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 SHC4Q6S5L8 630 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 ANKRD42Q8N9B4 389 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 LINS1Q8NG48 757 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 UHMK1Q8TAS1 419 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 NMD3Q96D46 503 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 NOX5Q96PH1 765 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 PRMT1Q99873 361 aaKnown RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 PPP1R9AQ9ULJ8 1098 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 LHX6Q9UPM6 363 aa7.7□□□□□ -1.18
NECAP1-213ENST00000638883 USP15Q9Y4E8 981 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-213ENST00000638883 RIC1Q4ADV7 1423 aa7.69□□□□□ -1.18
NECAP1-213ENST00000638883 TTC26A0AVF1 554 aa7.69□□□□□ -1.18
NECAP1-213ENST00000638883 KCNJ18B7U540 433 aa7.69□□□□□ -1.18
NECAP1-213ENST00000638883 LDHAP00338 332 aaKnown RBP7.69□□□□□ -1.18
NECAP1-213ENST00000638883 NUDT7P0C024 238 aa7.69□□□□□ -1.18
NECAP1-213ENST00000638883 HSD17B3P37058 310 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms