RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 SENP1Q9P0U3 644 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 ZFP69BQ9UJL9 534 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 E5RI56 91 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 INO80B-WBP1J3KQ70 363 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 ZBED6P86452 979 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 KRR1Q13601 381 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 HIBCHQ6NVY1 386 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 C17orf53Q8N3J3 647 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 PPP1R2P1Q96PQ5 205 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 INO80BQ9C086 356 aaPredicted RBP19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 KIAA1586Q9HCI6 787 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 PKD2L2Q9NZM6 624 aa19.27■□□□□ 0.68
CACNA1A-247ENST00000637769 C16orf96A6NNT2 1141 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 LRRN2O75325 713 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 ECM2O94769 699 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 ELF1P32519 619 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 PPP6R3Q5H9R7 873 aaPredicted RBP19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 GADL1Q6ZQY3 521 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 THEM5Q8N1Q8 247 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 PROM2Q8N271 834 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 FIS1Q9Y3D6 152 aa19.27■□□□□ 0.67
CACNA1A-247ENST00000637769 NAALADL2Q58DX5 795 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 SLC35F6Q8N357 371 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 RPF1Q9H9Y2 349 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 NUGGCQ68CJ6 796 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 TMED8Q6PL24 325 aaPredicted RBP19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 PI4K2BQ8TCG2 481 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 MRPS26Q9BYN8 205 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 CPA1P15085 419 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 POLA2Q14181 598 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 FBXO18Q8NFZ0 1043 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 PAGR1Q9BTK6 254 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 RASA4BC9J798 803 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 RASA4O43374 803 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 LAMB3Q13751 1172 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 NAA35Q5VZE5 725 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 WDR47O94967 919 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 UIMC1Q96RL1 719 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 PPARGC1AQ9UBK2 798 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 ZNF229Q9UJW7 825 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 JAK2O60674 1132 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 DEPDC1Q5TB30 811 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 TOGARAM2Q6ZUX3 1019 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 IFNL3Q8IZI9 196 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 OSBPP22059 807 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 KRT72Q14CN4 511 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 TMEM245Q9H330 911 aa19.26■□□□□ 0.67
CACNA1A-247ENST00000637769 GNAT1P11488 350 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 CCDC85BQ15834 202 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 STMN3Q9NZ72 180 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 SHANK2Q9UPX8 1470 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 PSMA2P25787 234 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 MXI1P50539 228 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 C16orf72Q14CZ0 275 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 ANKS3Q6ZW76 656 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 MYL10Q9BUA6 226 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 NFU1Q9UMS0 254 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 SEMA3FQ13275 785 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 NUDT18Q6ZVK8 323 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 NHEJ1Q9H9Q4 299 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 GCP02774 474 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 ACAP3Q96P50 834 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 SLC4A1P02730 911 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 ZSWIM6Q9HCJ5 1215 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 SESN1Q9Y6P5 492 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 IFT43Q96FT9 208 aa19.25■□□□□ 0.67
CACNA1A-247ENST00000637769 FASTKD5Q7L8L6 764 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 STAMQ92783 540 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 SH3GL3Q99963 347 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 ERVV-2B6SEH9 535 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 SLFNL1Q499Z3 407 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 MRFAP1Q9Y605 127 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 CYTH2Q99418 400 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 PCDHB8Q9UN66 801 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 MYH7P12883 1935 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 AARS2Q5JTZ9 985 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 ITPRIPL1Q6GPH6 555 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 TDRD7Q8NHU6 1098 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 FOPNLQ96NB1 174 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 ZNF556Q9HAH1 456 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 M0R2C6 588 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 KRT7P08729 469 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 RPS8P62241 208 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 GOLPH3LQ9H4A5 285 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 HNRNPCP07910 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 INPP5AQ14642 412 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 SLC39A14Q15043 492 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 SCFD1Q8WVM8 642 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 PBXIP1Q96AQ6 731 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 TBC1D23Q9NUY8 699 aa19.24■□□□□ 0.67
CACNA1A-247ENST00000637769 TNKSO95271 1327 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms