RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CTNNA1P35221 906 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 TNNC1P63316 161 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 KAT2BQ92831 832 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 PCIF1Q9H4Z3 704 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 TAS2R14Q9NYV8 317 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 AIPL1Q9NZN9 384 aa15.32■□□□□ 0.04
CACNA1A-228ENST00000636610 SHOX2O60902 331 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 GCFC2P16383 781 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 SPIRE1Q08AE8 756 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ALS2CLQ60I27 953 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ABCB11O95342 1321 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 DDX3XO00571 662 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 GNA14O95837 355 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 NDUFB10O96000 172 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 LSP1P33241 339 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ECE1P42892 770 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 NOVP48745 357 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ZNF746Q6NUN9 644 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ETNPPLQ8TBG4 499 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 SLC35C1Q96A29 364 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 EIF2AK1Q9BQI3 630 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 FBXL5Q9UKA1 691 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 ASTN1O14525 1302 aa15.31■□□□□ 0.04
CACNA1A-228ENST00000636610 H0YHG0 523 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 EVI5O60447 810 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ERLIN2O94905 339 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 FAM13AO94988 1023 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 FGGP02679 453 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 HSD17B3P37058 310 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 GALCP54803 685 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ITIH3Q06033 890 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ORC2Q13416 577 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 SH3BP5LQ7L8J4 393 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ZNF572Q7Z3I7 529 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 PPM1EQ8WY54 764 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 CAVIN3Q969G5 261 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 NUCKS1Q9H1E3 243 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 IGSF9BQ9UPX0 1349 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 MYO1FO00160 1098 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 H2AFZP0C0S5 128 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 MEX3CQ5U5Q3 659 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 GBP6Q6ZN66 633 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 H2AFVQ71UI9 128 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 TPCN2Q8NHX9 752 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 GLG1Q92896 1179 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 LENG9Q96B70 501 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 AMNQ9BXJ7 453 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 SBF2Q86WG5 1849 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 RREB1Q92766 1687 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 TLDC2A0PJX2 215 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 GOLGA6L10A6NI86 522 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ERMNQ8TAM6 284 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 EDEM3Q9BZQ6 932 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 ATP8A1Q9Y2Q0 1164 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 CAPN7Q9Y6W3 813 aa15.3■□□□□ 0.04
CACNA1A-228ENST00000636610 FLOT1O75955 427 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 INPP5BP32019 993 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 IFT88Q13099 833 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 EPHA7Q15375 998 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 COA1Q9GZY4 146 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 RPA1P27694 616 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 USP11P51784 963 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 UAP1Q16222 522 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 CBWD6Q4V339 395 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 CBWD3Q5JTY5 395 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 CBWD5Q5RIA9 395 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 FAM186BQ8IYM0 893 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 SYT2Q8N9I0 419 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
CACNA1A-228ENST00000636610 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 PGRMC1O00264 195 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 TGFB1I1O43294 461 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 CALUO43852 315 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 MDM1Q8TC05 714 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 FAM198AQ9UFP1 575 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 NOVA2Q9UNW9 492 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms