RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SLFNL1Q499Z3 407 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 POTEDQ86YR6 584 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 ZBTB12Q9Y330 459 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 CCDC159P0C7I6 412 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 CCDC124Q96CT7 223 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 HOMER3Q9NSC5 361 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 INTS9Q9NV88 658 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 L3MBTL1Q9Y468 752 aa19.12■□□□□ 0.65
CACNA1A-227ENST00000636549 HOXD10P28358 340 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TCEA2Q15560 299 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 CCNYL1Q8N7R7 359 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 M0QYV0 167 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 IL13P35225 146 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 IFT88Q13099 833 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 R3HDM1Q15032 1099 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 PAN2Q504Q3 1202 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TJAP1Q5JTD0 557 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 CHMP1BQ7LBR1 199 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 SYCE1LA8MT33 242 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 HUS1O60921 280 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 PHKG2P15735 406 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 IL9RQ01113 521 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 WHAMMP3Q1A5X7 153 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TRIML1Q8N9V2 468 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TUBGCP2Q9BSJ2 902 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 KLHL11Q9NVR0 708 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 PPP2R2CQ9Y2T4 447 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TSPOAP1O95153 1857 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 ATXN3P54252 364 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 SYTL3Q4VX76 610 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 GSDMAQ96QA5 445 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 ZBTB18Q99592 522 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 PFDN1O60925 122 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 EIF4A1P60842 406 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 ANGPT1Q15389 498 aa19.11■□□□□ 0.65
CACNA1A-227ENST00000636549 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SCRN1Q12765 414 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SPDYAQ5MJ70 313 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 ZC4H2Q9NQZ6 224 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 HS6ST3Q8IZP7 471 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 TCP11Q8WWU5 503 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SLC16A4O15374 487 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 GNAT1P11488 350 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 GPC3P51654 580 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 ENOX1Q8TC92 643 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 ARHGAP10A1A4S6 786 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SGSM2O43147 1006 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 LMBRD2Q68DH5 695 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 TRIM4Q9C037 500 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SPTLC1O15269 473 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 CYP2D6P10635 497 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 PAMP19021 973 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 COPB1P53618 953 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 TBL3Q12788 808 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 MTMR1Q13613 665 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 SWSAP1Q6NVH7 229 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 LVRNQ6Q4G3 990 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 RGL1Q9NZL6 768 aa19.1■□□□□ 0.65
CACNA1A-227ENST00000636549 PRRG1O14668 218 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 ECE2O60344 883 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 ECEL1O95672 775 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 OR6J1Q8NGC5 347 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 SLC13A1Q9BZW2 595 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 COPRSQ9NQ92 184 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 APOA4P06727 396 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 ZNF699Q32M78 642 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 TDRD7Q8NHU6 1098 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 SNX21Q969T3 373 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 ATP9BO43861 1147 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 PPARGP37231 505 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 CCT5P48643 541 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 SH2D3AQ9BRG2 576 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 DUOX2Q9NRD8 1548 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 SEC24DO94855 1032 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 PYROXD1Q8WU10 500 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 ATL3Q6DD88 541 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 TTC23LQ6PF05 361 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 MAP3K15Q6ZN16 1313 aa19.09■□□□□ 0.65
CACNA1A-227ENST00000636549 KBTBD13C9JR72 458 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 WBP4O75554 376 aaKnown RBP19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 NR5A1Q13285 461 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 FAN1Q9Y2M0 1017 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 A0A0G2JND7 137 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 PLA2G4BP0C869 781 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 EXOC1LA0A1B0GW35 172 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 PJA2O43164 708 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 CYP2B6P20813 491 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 ARHGAP25P42331 645 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 PCSK7Q16549 785 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 KIZQ2M2Z5 673 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 PKN3Q6P5Z2 889 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 LRRC31Q6UY01 552 aa19.08■□□□□ 0.65
CACNA1A-227ENST00000636549 UBXN8O00124 270 aa19.08■□□□□ 0.64
CACNA1A-227ENST00000636549 TNPO2O14787 897 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms