RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 RSPH10B2B2RC85 870 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 POLR2DO15514 142 aaKnown RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 PPP6R2O75170 966 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 VTNP04004 478 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 RSPH10BP0C881 870 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 CDK7P50613 346 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 JAK3P52333 1124 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 PSMC5P62195 406 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 ADAM17P78536 824 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 PDIA5Q14554 519 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 TMEM266Q2M3C6 531 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 TMEM143Q96AN5 459 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 DHX58Q96C10 678 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 NAP1L4Q99733 375 aaKnown RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 RUSC1Q9BVN2 902 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 FAM49AQ9H0Q0 323 aaPredicted RBP9.54□□□□□ -0.88
CDKL5-209ENST00000635828 SUGCTQ9HAC7 445 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 GTF2IRD1Q9UHL9 959 aa9.54□□□□□ -0.88
CDKL5-209ENST00000635828 TRIM43BA6NCK2 446 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 MOXD2PA6NHM9 499 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 CTSHP09668 335 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PFKFB1P16118 471 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 KLRC1P26715 233 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 SFNP31947 248 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PPFIA1Q13136 1202 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 FAM126BQ8IXS8 530 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 HPS3Q969F9 1004 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 TRIM43Q96BQ3 446 aaPredicted RBP9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 CEP131Q9UPN4 1083 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 GINS2Q9Y248 185 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 ARVCFO00192 962 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 LAD1O00515 517 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 NR1I2O75469 434 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDKL5-209ENST00000635828 RARRES1P49788 294 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PTGISQ16647 500 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 LONRF3Q496Y0 759 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PLPPR4Q7Z2D5 763 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 NECAB2Q7Z6G3 386 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 METTL13Q8N6R0 699 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 DNAJB3Q8WWF6 145 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 SCLYQ96I15 445 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 XPNPEP1Q9NQW7 623 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 USO1O60763 962 aaKnown RBP9.53□□□□□ -0.88
CDKL5-209ENST00000635828 UBA7P41226 1012 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 RTP1P59025 263 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 RESP18Q5W5W9 173 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 ATP8B4Q8TF62 1192 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 ATP6V0A1Q93050 837 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
CDKL5-209ENST00000635828 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
CDKL5-209ENST00000635828 LONP1P36776 959 aaKnown RBP9.52□□□□□ -0.88
CDKL5-209ENST00000635828 CCL23P55773 120 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 TARBP2Q15633 366 aaKnown RBP9.52□□□□□ -0.88
CDKL5-209ENST00000635828 XKR9Q5GH70 373 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 KRT79Q5XKE5 535 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 BLZF1Q9H2G9 400 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 ZSWIM4Q9H7M6 989 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.88
CDKL5-209ENST00000635828 ZMYND8Q9ULU4 1186 aaPredicted RBP9.52□□□□□ -0.88
CDKL5-209ENST00000635828 MUC3AQ02505 3323 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 C22orf31O95567 290 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 FGFR4P22455 802 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 ORC2Q13416 577 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 SNW1Q13573 536 aaKnown RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 E2F4Q16254 413 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TCTN1Q2MV58 587 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 NFRKBQ6P4R8 1299 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 C7orf61Q8IZ16 206 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 RASSF8Q8NHQ8 419 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TMEM40Q8WWA1 233 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 FGFBP2Q9BYJ0 223 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TUBE1Q9UJT0 475 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TRANK1O15050 2925 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 CYP2C18P33260 490 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 GPNMBQ14956 572 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 ADALQ6DHV7 355 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 MTHFD1LQ6UB35 978 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 C4orf19Q8IY42 314 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 GLIS3Q8NEA6 775 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 BSNDQ8WZ55 320 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 VWCEQ96DN2 955 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 POLR3CQ9BUI4 534 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 LMBRD1Q9NUN5 540 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 SERTAD1Q9UHV2 236 aa9.52□□□□□ -0.89
CDKL5-209ENST00000635828 ZNF215Q9UL58 517 aaPredicted RBP9.52□□□□□ -0.89
CDKL5-209ENST00000635828 CUTAO60888 179 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms