RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 ATG7O95352 703 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 GGPS1O95749 300 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 TPM3P06753 285 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 EEF1GP26641 437 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 HOXD13P35453 343 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 PBX1P40424 430 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 PRKCEQ02156 737 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 GRB14Q14449 540 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 XKR9Q5GH70 373 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 TMEM63BQ5T3F8 832 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 MYCT1Q8N699 235 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 CCDC43Q96MW1 224 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 CTAGE1Q96RT6 745 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 TSG101Q99816 390 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 VPS16Q9H269 839 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 MRPL44Q9H9J2 332 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 ANKEF1Q9NU02 776 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 IMPACTQ9P2X3 320 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
CACNA1A-216ENST00000635742 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 LRRC10BA6NIK2 292 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 ASB14A6NK59 587 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 GCNT3O95395 438 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 ATP4AP20648 1035 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 NEDD9Q14511 834 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 ARMCX5Q6P1M9 558 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 FOXR2Q6PJQ5 311 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 PCYT2Q99447 389 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 GPRC5CQ9NQ84 441 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 ZNF302Q9NR11 478 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 PYCARDQ9ULZ3 195 aa11.04□□□□□ -0.64
CACNA1A-216ENST00000635742 IGKV6D-21A0A0A0MT36 114 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 N4BP3O15049 544 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 KIF20AO95235 890 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 TGFB3P10600 412 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 GOLGA8FQ08AF8 430 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 KCNA1Q09470 495 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 GOLGA8DPQ0D2H9 430 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ODR4Q5SWX8 454 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 CCDC62Q6P9F0 684 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 PLEKHH3Q7Z736 793 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 FAM114A1Q8IWE2 563 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ANKRD20A12PQ8NF67 263 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 COPS5Q92905 334 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ZCCHC17Q9NP64 241 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 MAGEC2Q9UBF1 373 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 SEL1LQ9UBV2 794 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ABT1Q9ULW3 272 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 EIF3DO15371 548 aaKnown RBP eCLIP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 STRNO43815 780 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 MSNP26038 577 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 MAPK4P31152 587 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 GSDMDP57764 484 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 TBX2Q13207 712 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 SPECC1LQ69YQ0 1117 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ZC3H3Q8IXZ2 948 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ZNF507Q8TCN5 953 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 CEP170P1Q96L14 293 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-216ENST00000635742 LGALS16A8MUM7 142 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 PPP1R37O75864 691 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 OATP04181 439 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 SOX10P56693 466 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 CCZ1BP86790 482 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 CCZ1P86791 482 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 XKR3Q5GH77 459 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 CEP135Q66GS9 1140 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 OTUD6AQ7L8S5 288 aa11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 ZNF467Q7Z7K2 595 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 C17orf53Q8N3J3 647 aaPredicted RBP11.02□□□□□ -0.65
CACNA1A-216ENST00000635742 NPLOC4Q8TAT6 608 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms