RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 CDK17Q00537 523 aa15.75■□□□□ 0.11
PTBP1-221ENST00000635647 ZNF211Q13398 564 aaPredicted RBP15.75■□□□□ 0.11
PTBP1-221ENST00000635647 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
PTBP1-221ENST00000635647 FAM178BQ8IXR5 827 aa15.75■□□□□ 0.11
PTBP1-221ENST00000635647 PRPF38AQ8NAV1 312 aaKnown RBP15.75■□□□□ 0.11
PTBP1-221ENST00000635647 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
PTBP1-221ENST00000635647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.75■□□□□ 0.11
PTBP1-221ENST00000635647 F5H6K3 240 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 hCG_1984214I3L0E3 225 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 AGPSO00116 658 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 CTNNA1P35221 906 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 COPB2P35606 906 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 KLRC3Q07444 240 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 ZNF713Q8N859 430 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 KAT2BQ92831 832 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 DNAJC19Q96DA6 116 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 REEP2Q9BRK0 252 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 AMNQ9BXJ7 453 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 TLR2O60603 784 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 H2AFZP0C0S5 128 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 ALAS1P13196 640 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 GCFC2P16383 781 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 NMT1P30419 496 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 CRKP46108 304 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 CASP4P49662 377 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 CDC42EP5Q6NZY7 148 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 H2AFVQ71UI9 128 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 B4GALNT4Q76KP1 1039 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 AENQ8WTP8 325 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 BCAS3Q9H6U6 928 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 RAD51CO43502 376 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 SARNPP82979 210 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 BIRC2Q13490 618 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 PNMA8AQ86V59 439 aaPredicted RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 CATSPER3Q86XQ3 398 aa15.74■□□□□ 0.11
PTBP1-221ENST00000635647 RNF10Q8N5U6 811 aaKnown RBP15.74■□□□□ 0.11
PTBP1-221ENST00000635647 ZBTB39O15060 712 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 KRT5P13647 590 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 GCKP35557 465 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 SEMA3FQ13275 785 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 TAB3Q8N5C8 712 aaPredicted RBP15.73■□□□□ 0.11
PTBP1-221ENST00000635647 PLAAQ9Y263 795 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 KCNA1Q09470 495 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 SLFN12Q8IYM2 578 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 CEP63Q96MT8 703 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 PAIP2Q9BPZ3 127 aaKnown RBP15.73■□□□□ 0.11
PTBP1-221ENST00000635647 PTPN22Q9Y2R2 807 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 UCHL3P15374 230 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 AARSP49588 968 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■■■□ 23.3
PTBP1-221ENST00000635647 NEDD9Q14511 834 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 NAB2Q15742 525 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 KNOP1Q1ED39 458 aaKnown RBP15.73■□□□□ 0.11
PTBP1-221ENST00000635647 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 TACO1Q9BSH4 297 aaKnown RBP15.73■□□□□ 0.11
PTBP1-221ENST00000635647 CASZ1Q86V15 1759 aa15.73■□□□□ 0.11
PTBP1-221ENST00000635647 STAT1P42224 750 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 AOC3Q16853 763 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 AMACRQ9UHK6 382 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 NR3C1P04150 777 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 DPH6Q7L8W6 267 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 PPM1KQ8N3J5 372 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 LARGE2Q8N3Y3 721 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 CASKIN2Q8WXE0 1202 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SWAP70Q9UH65 585 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 GCOM1H8Y6P7 765 aaPredicted RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SPOPO43791 374 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 KIF4AO95239 1232 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 MYZAPP0CAP1 466 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 DLATP10515 647 aaKnown RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SSTR3P32745 418 aaPredicted RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SLCO1A2P46721 670 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 SEC24CP53992 1094 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 CETN1Q12798 172 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 TNIP1Q15025 636 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 TMEM119Q4V9L6 283 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 ALS2CLQ60I27 953 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 HGSNATQ68CP4 663 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
PTBP1-221ENST00000635647 PURBQ96QR8 312 aaKnown RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
PTBP1-221ENST00000635647 TESPA1A2RU30 521 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-221ENST00000635647 H0YIN7 160 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 NR1D1P20393 614 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 SHMT1P34896 483 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 ZNF571Q7Z3V5 609 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-221ENST00000635647 GLYCTKQ8IVS8 523 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 TRIM59Q8IWR1 403 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 C21orf2O43822 256 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 NOL4O94818 638 aa15.71■□□□□ 0.11
PTBP1-221ENST00000635647 IL1R1P14778 569 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms