RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 PALMO75781 387 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 CLSTN1O94985 981 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 SYF2O95926 243 aaKnown RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 GH2P01242 217 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 NR3C1P04150 777 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 FAM86B2P0C5J1 330 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 MYBL2P10244 700 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 MUTP22033 750 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 CASP5P51878 434 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 SNAP25P60880 206 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 PSMC6P62333 389 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 NNTQ13423 1086 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 IRF5Q13568 498 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 TTLL12Q14166 644 aaPredicted RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 EXOC3L4Q17RC7 722 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 KIAA0753Q2KHM9 967 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 GBP6Q6ZN66 633 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 GSPT2Q8IYD1 628 aaKnown RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 FAM133AQ8N9E0 248 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 SPAG5Q96R06 1193 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 EIF2AK1Q9BQI3 630 aaKnown RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 LRRC1Q9BTT6 524 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 TUFT1Q9NNX1 390 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 OLFML3Q9NRN5 406 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 STK32BQ9NY57 414 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 TMOD2Q9NZR1 351 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 HERC5Q9UII4 1024 aaKnown RBP8.84□□□□□ -0.99
GPC3-204ENST00000631057 FBXL5Q9UKA1 691 aa8.84□□□□□ -0.99
GPC3-204ENST00000631057 A0A087X0T9 212 aa8.83□□□□□ -1
GPC3-204ENST00000631057 GTPBP10A4D1E9 387 aaKnown RBP8.83□□□□□ -1
GPC3-204ENST00000631057 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
GPC3-204ENST00000631057 OPA1O60313 960 aa8.83□□□□□ -1
GPC3-204ENST00000631057 PHACTR2O75167 634 aa8.83□□□□□ -1
GPC3-204ENST00000631057 PRPF6O94906 941 aaKnown RBP8.83□□□□□ -1
GPC3-204ENST00000631057 FAM13AO94988 1023 aa8.83□□□□□ -1
GPC3-204ENST00000631057 FAM228BP0C875 321 aa8.83□□□□□ -1
GPC3-204ENST00000631057 MYBP10242 640 aa8.83□□□□□ -1
GPC3-204ENST00000631057 UCHL3P15374 230 aa8.83□□□□□ -1
GPC3-204ENST00000631057 KLRC1P26715 233 aa8.83□□□□□ -1
GPC3-204ENST00000631057 CXCR5P32302 372 aa8.83□□□□□ -1
GPC3-204ENST00000631057 HOXD13P35453 343 aa8.83□□□□□ -1
GPC3-204ENST00000631057 PRKCIP41743 596 aa8.83□□□□□ -1
GPC3-204ENST00000631057 MATR3P43243 847 aaKnown RBP eCLIP8.83□□□□□ -16e-7■■■□□ 15.9
GPC3-204ENST00000631057 ARID5AQ03989 594 aa8.83□□□□□ -1
GPC3-204ENST00000631057 EPHA7Q15375 998 aa8.83□□□□□ -1
GPC3-204ENST00000631057 SLC15A2Q16348 729 aa8.83□□□□□ -1
GPC3-204ENST00000631057 NFIL3Q16649 462 aa8.83□□□□□ -1
GPC3-204ENST00000631057 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
GPC3-204ENST00000631057 ALS2CLQ60I27 953 aa8.83□□□□□ -1
GPC3-204ENST00000631057 STXBP4Q6ZWJ1 553 aa8.83□□□□□ -1
GPC3-204ENST00000631057 SND1Q7KZF4 910 aaKnown RBP eCLIP8.83□□□□□ -16e-69■■■■□ 22
GPC3-204ENST00000631057 VPS36Q86VN1 386 aa8.83□□□□□ -1
GPC3-204ENST00000631057 IFT20Q8IY31 132 aa8.83□□□□□ -1
GPC3-204ENST00000631057 SUPT20HQ8NEM7 779 aa8.83□□□□□ -1
GPC3-204ENST00000631057 TAF4BQ92750 862 aa8.83□□□□□ -1
GPC3-204ENST00000631057 CAVIN3Q969G5 261 aa8.83□□□□□ -1
GPC3-204ENST00000631057 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
GPC3-204ENST00000631057 BHMT2Q9H2M3 363 aa8.83□□□□□ -1
GPC3-204ENST00000631057 TDRD3Q9H7E2 651 aaKnown RBP8.83□□□□□ -1
GPC3-204ENST00000631057 SEL1LQ9UBV2 794 aa8.83□□□□□ -1
GPC3-204ENST00000631057 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
GPC3-204ENST00000631057 PRR12Q9ULL5 1215 aa8.83□□□□□ -1
GPC3-204ENST00000631057 EP400Q96L91 3159 aa8.83□□□□□ -1
GPC3-204ENST00000631057 ASTN1O14525 1302 aa8.83□□□□□ -1
GPC3-204ENST00000631057 OPLAHO14841 1288 aa8.82□□□□□ -1
GPC3-204ENST00000631057 FLOT1O75955 427 aa8.82□□□□□ -1
GPC3-204ENST00000631057 GFPT2O94808 682 aa8.82□□□□□ -1
GPC3-204ENST00000631057 GCNT3O95395 438 aa8.82□□□□□ -1
GPC3-204ENST00000631057 FTCDO95954 541 aa8.82□□□□□ -1
GPC3-204ENST00000631057 PON1P27169 355 aa8.82□□□□□ -1
GPC3-204ENST00000631057 HOXA13P31271 388 aaPredicted RBP8.82□□□□□ -1
GPC3-204ENST00000631057 GGCXP38435 758 aa8.82□□□□□ -1
GPC3-204ENST00000631057 STAT2P52630 851 aa8.82□□□□□ -1
GPC3-204ENST00000631057 TNNC1P63316 161 aa8.82□□□□□ -1
GPC3-204ENST00000631057 APBA1Q02410 837 aa8.82□□□□□ -1
GPC3-204ENST00000631057 CYP4A11Q02928 519 aa8.82□□□□□ -1
GPC3-204ENST00000631057 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
GPC3-204ENST00000631057 PAK2Q13177 524 aa8.82□□□□□ -1
GPC3-204ENST00000631057 PPP2R5CQ13362 524 aa8.82□□□□□ -1
GPC3-204ENST00000631057 EZH2Q15910 746 aaKnown RBP8.82□□□□□ -1
GPC3-204ENST00000631057 DCAF17Q5H9S7 520 aaPredicted RBP8.82□□□□□ -1
GPC3-204ENST00000631057 RINT1Q6NUQ1 792 aa8.82□□□□□ -1
GPC3-204ENST00000631057 DPY19L2P1Q6NXN4 242 aa8.82□□□□□ -1
GPC3-204ENST00000631057 IRF2BP2Q7Z5L9 587 aa8.82□□□□□ -1
GPC3-204ENST00000631057 HDAC7Q8WUI4 952 aa8.82□□□□□ -1
GPC3-204ENST00000631057 CNKSR1Q969H4 720 aa8.82□□□□□ -1
GPC3-204ENST00000631057 CSRNP1Q96S65 589 aa8.82□□□□□ -1
GPC3-204ENST00000631057 PSMB7Q99436 277 aa8.82□□□□□ -1
GPC3-204ENST00000631057 RBM12Q9NTZ6 932 aaKnown RBP8.82□□□□□ -1
GPC3-204ENST00000631057 ADAMTS1Q9UHI8 967 aa8.82□□□□□ -1
GPC3-204ENST00000631057 DAAM1Q9Y4D1 1078 aa8.82□□□□□ -1
GPC3-204ENST00000631057 IGLV3-22A0A075B6J6 115 aa8.82□□□□□ -1
GPC3-204ENST00000631057 RSPH10B2B2RC85 870 aa8.82□□□□□ -1
GPC3-204ENST00000631057 GOLGA8KD6RF30 607 aa8.82□□□□□ -1
GPC3-204ENST00000631057 GCOM1H8Y6P7 765 aaPredicted RBP8.82□□□□□ -1
GPC3-204ENST00000631057 EML1O00423 815 aa8.82□□□□□ -1
GPC3-204ENST00000631057 HSF2BPO75031 334 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms