RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
CHD2-218ENST00000629346 GINS2Q9Y248 185 aa13.76□□□□□ -0.21
CHD2-218ENST00000629346 MAP1BP46821 2468 aaKnown RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 ZBTB5O15062 677 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 NARSO43776 548 aaKnown RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 CFHP08603 1231 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 INSRRP14616 1297 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 PDE4AP27815 886 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 KCNT2Q6UVM3 1135 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 IQCA1Q86XH1 822 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 SAMD3Q8N6K7 520 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 MRPL43Q8N983 215 aaKnown RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 ACSF2Q96CM8 615 aaPredicted RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
CHD2-218ENST00000629346 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
CHD2-218ENST00000629346 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
CHD2-218ENST00000629346 OTOGLQ3ZCN5 2332 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 KLRF2D3W0D1 207 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 STAM2O75886 525 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 SP9P0CG40 484 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 KRT76Q01546 638 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
CHD2-218ENST00000629346 KIAA0319Q5VV43 1072 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 TMC5Q6UXY8 1006 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 TMEM87AQ8NBN3 555 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 FAM227BQ96M60 508 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 RNF41Q9H4P4 317 aaPredicted RBP13.74□□□□□ -0.21
CHD2-218ENST00000629346 KCNK12Q9HB15 430 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 CHD8Q9HCK8 2581 aa13.74□□□□□ -0.21
CHD2-218ENST00000629346 LOXHD1Q8IVV2 1947 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 DCDC2BA2VCK2 349 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 KRBA1A5PL33 1030 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 RRN3P2A6NIE6 340 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 ATP9AO75110 1047 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 CXCL14O95715 111 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 RPLP2P05387 115 aaKnown RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 DCNP07585 359 aaKnown RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 COL9A2Q14055 689 aaPredicted RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 LRRC55Q6ZSA7 311 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 SLC24A5Q71RS6 500 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 SEPT1Q8WYJ6 367 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 SMARCAD1Q9H4L7 1026 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 RGS18Q9NS28 235 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
CHD2-218ENST00000629346 NOC2LQ9Y3T9 749 aaKnown RBP13.73□□□□□ -0.21
CHD2-218ENST00000629346 A0A0D9SFI3 127 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 B4E1Z4 1266 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 C9IYK1 514 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 EPCAMP16422 314 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
CHD2-218ENST00000629346 SUMF1Q8NBK3 374 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 GIMAP8Q8ND71 665 aaPredicted RBP13.72□□□□□ -0.21
CHD2-218ENST00000629346 AUTS2Q8WXX7 1259 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 PIGSQ96S52 555 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 TBC1D17Q9HA65 648 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 CDHR5Q9HBB8 845 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 NCDNQ9UBB6 729 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 ST3GAL5Q9UNP4 418 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 PCDHA2Q9Y5H9 948 aa13.72□□□□□ -0.21
CHD2-218ENST00000629346 USP24Q9UPU5 2620 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 SDHBP21912 280 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 PPM1AP35813 382 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 TBC1D8BQ0IIM8 1120 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 CCDC149Q6ZUS6 474 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 NLRX1Q86UT6 975 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 C1orf210Q8IVY1 113 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 RSAD2Q8WXG1 361 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 DZANK1Q9NVP4 752 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.21
CHD2-218ENST00000629346 FRMPD4Q14CM0 1322 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
CHD2-218ENST00000629346 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms