RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 OATP04181 439 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 MYL3P08590 195 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 CDC25AP30304 524 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 HOXC8P31273 242 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 TXLNAP40222 546 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 UBA7P41226 1012 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 CYP4A11Q02928 519 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 GRB10Q13322 594 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 ECM1Q16610 540 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 UTP14CQ5TAP6 766 aaKnown RBP11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 PDXDC2PQ6P474 469 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 CXCL17Q6UXB2 119 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 SLC43A3Q8NBI5 491 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 ATP8B4Q8TF62 1192 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 GLG1Q92896 1179 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 COL1A2P08123 1366 aa11.02□□□□□ -0.65
SOX2-OT-249ENST00000628810 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 XRCC6P12956 609 aaKnown RBP eCLIP11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 PSEN2P49810 448 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 CTTNQ14247 550 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 MFSD10Q14728 455 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 PLCB4Q15147 1175 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 E2F4Q16254 413 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 XKR3Q5GH77 459 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 SPECC1Q5M775 1068 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 ANO5Q75V66 913 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 UBE2Q1Q7Z7E8 422 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 MRPS27Q92552 414 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 ABHD8Q96I13 439 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 NIFKQ9BYG3 293 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 ANKEF1Q9NU02 776 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 GRIN2DO15399 1336 aa11.01□□□□□ -0.65
SOX2-OT-249ENST00000628810 A0A087X0B3 334 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 HBP1O60381 514 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 TFRCP02786 760 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 PFKFB1P16118 471 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 PLCG1P19174 1290 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 YWHABP31946 246 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 UBE2HP62256 183 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 PTPN11Q06124 597 aaPredicted RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 SNX17Q15036 470 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 KARSQ15046 597 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 TARBP2Q15633 366 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 NAALADL2Q58DX5 795 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 C1orf53Q5VUE5 145 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 CCDC73Q6ZRK6 1079 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 TPH2Q8IWU9 490 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 NACC1Q96RE7 527 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 CEP89Q96ST8 783 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 PYM1Q9BRP8 204 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 RNPEPQ9H4A4 650 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 GOLPH3LQ9H4A5 285 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 DDX19AQ9NUU7 478 aaKnown RBP11□□□□□ -0.65
SOX2-OT-249ENST00000628810 FAM13BQ9NYF5 915 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 STK17AQ9UEE5 414 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 CCDC39Q9UFE4 941 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 KCNH3Q9ULD8 1083 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
SOX2-OT-249ENST00000628810 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 MBLAC1A4D2B0 266 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 EYA4O95677 639 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 SMIM10L2AP0DMW4 78 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 SMIM10L2BP0DMW5 78 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 MARK3P27448 753 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 RARRES1P49788 294 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 NDUFA8P51970 172 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 PSMC6P62333 389 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 ADAM17P78536 824 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 OTUD6AQ7L8S5 288 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 KCNK18Q7Z418 384 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 FSIP1Q8NA03 581 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 ENGASEQ8NFI3 743 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 DIS3LQ8TF46 1054 aaKnown RBP10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 CDK5RAP3Q96JB5 506 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 CUEDC2Q9H467 287 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 STARD7Q9NQZ5 370 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 LMBRD1Q9NUN5 540 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 BLOC1S4Q9NUP1 217 aa10.99□□□□□ -0.65
SOX2-OT-249ENST00000628810 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms