RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 NAPAP54920 295 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 GDF10P55107 478 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 PURAQ00577 322 aaKnown RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 CTBSQ01459 385 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 PPIGQ13427 754 aaKnown RBP eCLIP7.33□□□□□ -1.24
TCF4-249ENST00000625716 COL9A3Q14050 684 aaPredicted RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 DGKDQ16760 1214 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 XRRA1Q6P2D8 792 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 CCDC62Q6P9F0 684 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 USP17L6PQ6QN14 398 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 RUFY3Q7L099 469 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 NLRX1Q86UT6 975 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 FAM126BQ8IXS8 530 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 BEND7Q8N7W2 519 aaPredicted RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 ZNF713Q8N859 430 aaPredicted RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 SLC43A3Q8NBI5 491 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 AFG1LQ8WV93 481 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 ABHD17AQ96GS6 310 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 SPATA33Q96N06 139 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 USP26Q9BXU7 913 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 GLT8D2Q9H1C3 349 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 RTEL1Q9NZ71 1219 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 DDX41Q9UJV9 622 aaKnown RBP7.33□□□□□ -1.24
TCF4-249ENST00000625716 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 BRCA2P51587 3418 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 SMCHD1A6NHR9 2005 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 ALPK3Q96L96 1907 aa7.33□□□□□ -1.24
TCF4-249ENST00000625716 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 NOP56O00567 594 aaKnown RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 PPFIA4O75335 1185 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 GGPS1O95749 300 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 CD4P01730 458 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 MMP3P08254 477 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 PRKCSHP14314 528 aaPredicted RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 ATP4AP20648 1035 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 ADCY7P51828 1080 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 SMTNP53814 917 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 PTPN11Q06124 597 aaPredicted RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 ARHGAP1Q07960 439 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 NEDD9Q14511 834 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 SHHQ15465 462 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 MAP7D1Q3KQU3 841 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 PLA2G4EQ3MJ16 856 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 LRIT3Q3SXY7 679 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 CELF3Q5SZQ8 465 aaKnown RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 PCNX4Q63HM2 1172 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 MFSD5Q6N075 450 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 NFRKBQ6P4R8 1299 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 C7orf31Q8N865 590 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 GIMAP8Q8ND71 665 aaPredicted RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 PPTC7Q8NI37 304 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 CCDC12Q8WUD4 166 aaPredicted RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 CDHR1Q96JP9 859 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 KATNAL1Q9BW62 490 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 TRPV6Q9H1D0 765 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 ALDH8A1Q9H2A2 487 aaPredicted RBP7.32□□□□□ -1.24
TCF4-249ENST00000625716 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 HIPK3Q9H422 1215 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 TBX21Q9UL17 535 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
TCF4-249ENST00000625716 MCM3APO60318 1980 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 SMCO2A6NFE2 343 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 LRRC37A2A6NM11 1700 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 MEIS2O14770 477 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 CPLX1O14810 134 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 FIBPO43427 364 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 SORBS3O60504 671 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 B4GALT4O60513 344 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 FOSP01100 380 aaPredicted RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 IGHA1P01876 353 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 ITGB8P26012 769 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 CDC27P30260 824 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 ICAM3P32942 547 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 ZNF76P36508 570 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 FOXK2Q01167 660 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 UBE2SQ16763 222 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 MCTP2Q6DN12 878 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 CPLX2Q6PUV4 134 aaKnown RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 TEX2Q8IWB9 1127 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 RPUSD2Q8IZ73 545 aaKnown RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 FBXL16Q8N461 479 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 IL31RAQ8NI17 732 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 RNPC3Q96LT9 517 aaKnown RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 ALG1Q9BT22 464 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 TM6SF1Q9BZW5 370 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 MTIF3Q9H2K0 278 aaKnown RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 C6orf50Q9HD87 102 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 RIC8AQ9NPQ8 531 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 PDRG1Q9NUG6 133 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 ATXN7L1Q9ULK2 861 aaPredicted RBP7.31□□□□□ -1.24
TCF4-249ENST00000625716 PCDHA6Q9UN73 950 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 PCDHA8Q9Y5H6 950 aa7.31□□□□□ -1.24
TCF4-249ENST00000625716 LCTP09848 1927 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms