RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 B4GALT4O60513 344 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 NEMFO60524 1076 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 F2P00734 622 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 PSAPP07602 524 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 CCNYL3P0C7X3 344 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 GNAT1P11488 350 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 PDCP20941 246 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 CIITAP33076 1130 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 MCM7P33993 719 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 NPY5RQ15761 445 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 PTGISQ16647 500 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 C1orf53Q5VUE5 145 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 LARP1BQ659C4 914 aaKnown RBP8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 NFRKBQ6P4R8 1299 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 MOXD1Q6UVY6 613 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 TRMT1LQ7Z2T5 733 aaKnown RBP8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 ANKRD33Q7Z3H0 272 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 FAM126BQ8IXS8 530 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 RETREG2Q8NC44 543 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 FBXO18Q8NFZ0 1043 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 TRPV6Q9H1D0 765 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 FOXP1Q9H334 677 aaPredicted RBP8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 HIPK3Q9H422 1215 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 BCAS3Q9H6U6 928 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 PDLIM7Q9NR12 457 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 ERAP1Q9NZ08 941 aa8.15□□□□□ -1.1
NPLOC4-221ENST00000625705 EMSYQ7Z589 1322 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 C17orf102A2RUQ5 167 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 WDR64B1ANS9 1081 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 M0R2N6 131 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 MSH4O15457 936 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SLC37A4O43826 429 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SMIM10L2AP0DMW4 78 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SMIM10L2BP0DMW5 78 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 CYP2C9P11712 490 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SFNP31947 248 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 JAK3P52333 1124 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 IGBP1P78318 339 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 FAAP100Q0VG06 881 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 PPFIA1Q13136 1202 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 ITGB3BPQ13352 177 aaPredicted RBP8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 BFSP2Q13515 415 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 CALCRLQ16602 461 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 Q4G0T1 1027 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 ZNF746Q6NUN9 644 aaPredicted RBP8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 MIER3Q7Z3K6 550 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 NOSTRINQ8IVI9 506 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SLFN12Q8IYM2 578 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 CRYGNQ8WXF5 182 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 TOX2Q96NM4 488 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 RIT2Q99578 217 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 C16orf70Q9BSU1 422 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 ZNF302Q9NR11 478 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 TRMT13Q9NUP7 481 aaKnown RBP8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 HDAC6Q9UBN7 1215 aa8.14□□□□□ -1.11
NPLOC4-221ENST00000625705 HTTP42858 3142 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 GRIN2DO15399 1336 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 CYP3A7-CYP3A51PA0A087WV96 503 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 GSTTP1A0A1W2PQM5 241 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 HOXD8P13378 290 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 CYP3A7P24462 503 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 MAGEA10P43363 369 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 CDK7P50613 346 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 STAT5BP51692 787 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SH3BP2P78314 561 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 FPGSQ05932 587 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 BECN1Q14457 450 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 PTPRNQ16849 979 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 TMEM266Q2M3C6 531 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 EARS2Q5JPH6 523 aaKnown RBP8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 TTC38Q5R3I4 469 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 NCAPH2Q6IBW4 605 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 PPP4R3AQ6IN85 833 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 GDF6Q6KF10 455 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 TMEM199Q8N511 208 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 KAT2BQ92831 832 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SLC5A5Q92911 643 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 BADQ92934 168 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 ATP6V0A1Q93050 837 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 GJA10Q969M2 543 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SNX21Q969T3 373 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 LENG9Q96B70 501 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 FAM20AQ96MK3 541 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 CCDC43Q96MW1 224 aaKnown RBP8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 UNC45AQ9H3U1 944 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 ATP13A2Q9NQ11 1180 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 EVA1BQ9NVM1 165 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 GTF2IRD1Q9UHL9 959 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 PCDHA10Q9Y5I2 948 aa8.13□□□□□ -1.11
NPLOC4-221ENST00000625705 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms