RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 FGFR1P11362 822 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 PDE4AP27815 886 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
SNX1-214ENST00000625244 LRRC55Q6ZSA7 311 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 SAMD3Q8N6K7 520 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 SENP7Q9BQF6 1050 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 CELF4Q9BZC1 486 aaKnown RBP16.06■□□□□ 0.16
SNX1-214ENST00000625244 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 KCNK12Q9HB15 430 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 SPEGQ15772 3267 aa16.06■□□□□ 0.16
SNX1-214ENST00000625244 NEDD4P46934 1319 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 GSTTP1A0A1W2PQM5 241 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 M0QZ92 97 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 RPLP2P05387 115 aaKnown RBP16.05■□□□□ 0.16
SNX1-214ENST00000625244 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
SNX1-214ENST00000625244 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 ADAM2Q99965 735 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 ZFYVE26Q68DK2 2539 aa16.05■□□□□ 0.16
SNX1-214ENST00000625244 CACNA1IQ9P0X4 2223 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 DCDC2BA2VCK2 349 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 C9IYK1 514 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 STAM2O75886 525 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 DCNP07585 359 aaKnown RBP16.04■□□□□ 0.16
SNX1-214ENST00000625244 CFHP08603 1231 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 INSRRP14616 1297 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 KRT17Q04695 432 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
SNX1-214ENST00000625244 XRRA1Q6P2D8 792 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 ESR2Q92731 530 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 GLG1Q92896 1179 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 ACSF2Q96CM8 615 aaPredicted RBP16.04■□□□□ 0.16
SNX1-214ENST00000625244 CEP295Q9C0D2 2601 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 FANCMQ8IYD8 2048 aa16.04■□□□□ 0.16
SNX1-214ENST00000625244 KDM3AQ9Y4C1 1321 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 DENND3A2RUS2 1198 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 ZBTB5O15062 677 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 ATP9AO75110 1047 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 ADRB1P08588 477 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
SNX1-214ENST00000625244 MS4A1P11836 297 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 EPCAMP16422 314 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 SDHBP21912 280 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 TBC1D8BQ0IIM8 1120 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 TMC5Q6UXY8 1006 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 C1orf210Q8IVY1 113 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 TRAPPC12Q8WVT3 735 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 TBC1D17Q9HA65 648 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 ATP6V0A4Q9HBG4 840 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 DZANK1Q9NVP4 752 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 WNT16Q9UBV4 365 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 NOC2LQ9Y3T9 749 aaKnown RBP16.03■□□□□ 0.16
SNX1-214ENST00000625244 LOXHD1Q8IVV2 1947 aa16.03■□□□□ 0.16
SNX1-214ENST00000625244 RRN3P2A6NIE6 340 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 KRT76Q01546 638 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 VARS2Q5ST30 1063 aaKnown RBP16.02■□□□□ 0.16
SNX1-214ENST00000625244 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 ENAHQ8N8S7 591 aaPredicted RBP16.02■□□□□ 0.16
SNX1-214ENST00000625244 SEPT1Q8WYJ6 367 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 CASD1Q96PB1 797 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 CDHR5Q9HBB8 845 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 SPG21Q9NZD8 308 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 CA14Q9ULX7 337 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.16
SNX1-214ENST00000625244 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 POTEMA6NI47 508 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 RFX1P22670 979 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 CA8P35219 290 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 PPM1AP35813 382 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 FAM189BP81408 668 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 SLC35G1Q2M3R5 365 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 MAML2Q8IZL2 1156 aaPredicted RBP16.01■□□□□ 0.15
SNX1-214ENST00000625244 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 FAM227BQ96M60 508 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 HELLSQ9NRZ9 838 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 RNF19AQ9NV58 838 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 NCDNQ9UBB6 729 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 CDV3Q9UKY7 258 aaKnown RBP16.01■□□□□ 0.15
SNX1-214ENST00000625244 ST3GAL5Q9UNP4 418 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
SNX1-214ENST00000625244 A0A0D9SFI3 127 aa16■□□□□ 0.15
SNX1-214ENST00000625244 KLRF2D3W0D1 207 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms