RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 FAM43AQ8N2R8 423 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 SHCBP1Q8NEM2 672 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 RDM1Q8NG50 284 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
ATRX-216ENST00000624403 FGD4Q96M96 766 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 ZHX3Q9H4I2 956 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 THAP9Q9H5L6 903 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 BCAS3Q9H6U6 928 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 ZSWIM4Q9H7M6 989 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 TBC1D7Q9P0N9 293 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
ATRX-216ENST00000624403 LIMA1Q9UHB6 759 aaKnown RBP11.46□□□□□ -0.57
ATRX-216ENST00000624403 TCEAL9Q9UHQ7 104 aa11.46□□□□□ -0.57
ATRX-216ENST00000624403 DNAJC25-GNG10A0A024R161 153 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 ARHGEF35A5YM69 484 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 RSPH10B2B2RC85 870 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 KCNJ18B7U540 433 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 RNF40O75150 1001 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 TBCAO75347 108 aaKnown RBP11.45□□□□□ -0.58
ATRX-216ENST00000624403 LYPLA2O95372 231 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 PGK2P07205 417 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 RSPH10BP0C881 870 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 HUNKP57058 714 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 SPAG1Q07617 926 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 KCNJ12Q14500 433 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 KCTD2Q14681 263 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 WDR78Q5VTH9 848 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 IRF2BP1Q8IU81 584 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 MYOCDQ8IZQ8 938 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 GPRC5AQ8NFJ5 357 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
ATRX-216ENST00000624403 SRRTQ9BXP5 876 aaKnown RBP11.45□□□□□ -0.58
ATRX-216ENST00000624403 PORCNQ9H237 461 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 EFCC1Q9HA90 598 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 IMPACTQ9P2X3 320 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 DBR1Q9UK59 544 aaKnown RBP11.45□□□□□ -0.58
ATRX-216ENST00000624403 TELO2Q9Y4R8 837 aa11.45□□□□□ -0.58
ATRX-216ENST00000624403 B4DLN1 442 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 SORBS3O60504 671 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 GAP43P17677 238 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
ATRX-216ENST00000624403 PSMC5P62195 406 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 SP2Q02086 613 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 NR1I3Q14994 352 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 KRT31Q15323 416 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 PTPN21Q16825 1174 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
ATRX-216ENST00000624403 SEPT14Q6ZU15 432 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 RASAL3Q86YV0 1011 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 SMAP1Q8IYB5 467 aaPredicted RBP11.44□□□□□ -0.58
ATRX-216ENST00000624403 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 CTAGE1Q96RT6 745 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 PTPN18Q99952 460 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 JPH1Q9HDC5 661 aaPredicted RBP11.44□□□□□ -0.58
ATRX-216ENST00000624403 RRAGDQ9NQL2 400 aaPredicted RBP11.44□□□□□ -0.58
ATRX-216ENST00000624403 TAB2Q9NYJ8 693 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 KCND2Q9NZV8 630 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 SLC9A2Q9UBY0 812 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 PCDHA10Q9Y5I2 948 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 COL4A3BPQ9Y5P4 624 aa11.44□□□□□ -0.58
ATRX-216ENST00000624403 LRRC10BA6NIK2 292 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 FAM13AO94988 1023 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 PSAPP07602 524 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 GUCY2CP25092 1073 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 EEF1GP26641 437 aaKnown RBP11.43□□□□□ -0.58
ATRX-216ENST00000624403 RARRES1P49788 294 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 CASP5P51878 434 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 COPB1P53618 953 aaKnown RBP11.43□□□□□ -0.58
ATRX-216ENST00000624403 GSDMDP57764 484 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 ACTR2P61160 394 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 CCNA1P78396 465 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 SP4Q02446 784 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 LRRC63Q05C16 580 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 LRMPQ12912 555 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 FILIP1LQ4L180 1135 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 EPM2AIP1Q7L775 607 aaPredicted RBP11.43□□□□□ -0.58
ATRX-216ENST00000624403 NELFCDQ8IXH7 590 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 ANKRD20A12PQ8NF67 263 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 CACTINQ8WUQ7 758 aaKnown RBP11.43□□□□□ -0.58
ATRX-216ENST00000624403 SCFD1Q8WVM8 642 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 TSG101Q99816 390 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
ATRX-216ENST00000624403 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 ADGRG1Q9Y653 693 aa11.43□□□□□ -0.58
ATRX-216ENST00000624403 TMEM150BA6NC51 233 aa11.42□□□□□ -0.58
ATRX-216ENST00000624403 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
ATRX-216ENST00000624403 BACH1O14867 736 aa11.42□□□□□ -0.58
ATRX-216ENST00000624403 TEX33O43247 280 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms