RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ODR4Q5SWX8 454 aa18■□□□□ 0.47
LDB3-208ENST00000623007 ZNF720Q7Z2F6 126 aa18■□□□□ 0.47
LDB3-208ENST00000623007 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
LDB3-208ENST00000623007 BANK1Q8NDB2 785 aa18■□□□□ 0.47
LDB3-208ENST00000623007 ZNF592Q92610 1267 aa18■□□□□ 0.47
LDB3-208ENST00000623007 SYN2Q92777 582 aaPredicted RBP18■□□□□ 0.47
LDB3-208ENST00000623007 HVCN1Q96D96 273 aa18■□□□□ 0.47
LDB3-208ENST00000623007 AGTPBP1Q9UPW5 1226 aa18■□□□□ 0.47
LDB3-208ENST00000623007 SIK3Q9Y2K2 1263 aa18■□□□□ 0.47
LDB3-208ENST00000623007 ADM5C9JUS6 153 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 KIF5CO60282 957 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 OSBPP22059 807 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 RARRES1P49788 294 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 HSP90AA2PQ14568 343 aaPredicted RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 MTERF4Q7Z6M4 381 aaKnown RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 EHBP1Q8NDI1 1231 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 PLAGL2Q9UPG8 496 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 GTPBP10A4D1E9 387 aaKnown RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 SOWAHDA6NJG2 315 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 SPATA31C2B4DYI2 1134 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 H0YCG3 227 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 NR3C1P04150 777 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 XRCC5P13010 732 aaKnown RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 GOLGA8FQ08AF8 430 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 GOLGA8DPQ0D2H9 430 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 PRKG1Q13976 671 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 PTPN21Q16825 1174 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 KCNV1Q6PIU1 500 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 GLIS3Q8NEA6 775 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 WNK4Q96J92 1243 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
LDB3-208ENST00000623007 EPN1Q9Y6I3 576 aaPredicted RBP17.99■□□□□ 0.47
LDB3-208ENST00000623007 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
LDB3-208ENST00000623007 TGFB3P10600 412 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 PLS3P13797 630 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 PSMC2P35998 433 aaKnown RBP17.98■□□□□ 0.47
LDB3-208ENST00000623007 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
LDB3-208ENST00000623007 MIS18BP1Q6P0N0 1132 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 TOGARAM2Q6ZUX3 1019 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 CACNA2D4Q7Z3S7 1137 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 SPATC1LQ9H0A9 340 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 JPH1Q9HDC5 661 aaPredicted RBP17.98■□□□□ 0.47
LDB3-208ENST00000623007 CEP72Q9P209 647 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 PNMA3Q9UL41 463 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 MYO6Q9UM54 1294 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
LDB3-208ENST00000623007 CTIFO43310 598 aaKnown RBP17.97■□□□□ 0.47
LDB3-208ENST00000623007 HIP1RO75146 1068 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 NDUFA10O95299 355 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 MYBP10242 640 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 KCNA2P16389 499 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 SMTNP53814 917 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 RTP1P59025 263 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 RAD9BQ6WBX8 426 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 SYT10Q6XYQ8 523 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 GADL1Q6ZQY3 521 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 TSGA10Q9BZW7 698 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 MMRN2Q9H8L6 949 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 L2HGDHQ9H9P8 463 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 LUC7LQ9NQ29 371 aaKnown RBP17.97■□□□□ 0.47
LDB3-208ENST00000623007 SLC9A2Q9UBY0 812 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 FRMD4BQ9Y2L6 1034 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 PPME1Q9Y570 386 aa17.97■□□□□ 0.47
LDB3-208ENST00000623007 RSPH10B2B2RC85 870 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 MAPK13O15264 365 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 PRPF6O94906 941 aaKnown RBP17.96■□□□□ 0.47
LDB3-208ENST00000623007 AFPP02771 609 aaKnown RBP17.96■□□□□ 0.47
LDB3-208ENST00000623007 RSPH10BP0C881 870 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 CASQ1P31415 396 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 CASP5P51878 434 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 FKBP1BP68106 108 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 TUBB4BP68371 445 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 PPP2R5AQ15172 486 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 TRIM65Q6PJ69 517 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 MCPH1Q8NEM0 835 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 OTUD5Q96G74 571 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 ELP3Q9H9T3 547 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 PLCB1Q9NQ66 1216 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 WRAP73Q9P2S5 460 aaPredicted RBP17.96■□□□□ 0.47
LDB3-208ENST00000623007 FBXL5Q9UKA1 691 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 ASTN1O14525 1302 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 EIF3CLB5ME19 914 aaKnown RBP17.96■□□□□ 0.47
LDB3-208ENST00000623007 PPP1R37O75864 691 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 ERVK-24P63145 666 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 ACCSQ96QU6 501 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 EIF3CQ99613 913 aaKnown RBP17.96■□□□□ 0.47
LDB3-208ENST00000623007 FGFBP2Q9BYJ0 223 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 DNAI1Q9UI46 699 aa17.96■□□□□ 0.47
LDB3-208ENST00000623007 MYH11P35749 1972 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms