RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 MYO1FO00160 1098 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ZBTB16Q05516 673 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 FUT2Q10981 343 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 GLE1Q53GS7 698 aaKnown RBP13.92□□□□□ -0.18
MSH6-215ENST00000622629 TRAPPC11Q7Z392 1133 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ZNF341Q9BYN7 854 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ANKZF1Q9H8Y5 726 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ANKFY1Q9P2R3 1169 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 TARSL2A2RTX5 802 aaKnown RBP13.92□□□□□ -0.18
MSH6-215ENST00000622629 KRT19P08727 400 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 MYBP10242 640 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 UCHL3P15374 230 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 CLUL1Q15846 466 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 IL17AQ16552 155 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 GKAP1Q5VSY0 366 aaPredicted RBP13.92□□□□□ -0.18
MSH6-215ENST00000622629 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
MSH6-215ENST00000622629 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 PARP2Q9UGN5 583 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 SNX24Q9Y343 169 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
MSH6-215ENST00000622629 MFAP3P55082 362 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 PLCB1Q9NQ66 1216 aa13.92□□□□□ -0.18
MSH6-215ENST00000622629 H3BQF6 201 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 ABL1P00519 1130 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 EZRP15311 586 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 TAB3Q8N5C8 712 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 HNRNPLLQ8WVV9 542 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 ARHGAP20Q9P2F6 1191 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 AMACRQ9UHK6 382 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 ABCB11O95342 1321 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 KRT15P19012 456 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 ATP5DP30049 168 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 PRELPP51888 382 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 KAZNQ674X7 775 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 DNAJC17Q9NVM6 304 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 A0A087X0T9 212 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 IPO5O00410 1097 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 FAM228BP0C875 321 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 NSFP46459 744 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 DR1Q01658 176 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 GLG1Q92896 1179 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 HSD3B7Q9H2F3 369 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 FEZ2Q9UHY8 353 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 LRRC10BA6NIK2 292 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 LRRIQ3A6PVS8 624 aaPredicted RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 TNFAIP1Q13829 316 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 POTEAQ6S8J7 498 aa13.91□□□□□ -0.18
MSH6-215ENST00000622629 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
MSH6-215ENST00000622629 MRC1P22897 1456 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CCDC188H7C350 402 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CTNND1O60716 968 aaKnown RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 KRT14P02533 472 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 NF2P35240 595 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 PTK2Q05397 1052 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 ZC2HC1CQ53FD0 456 aaPredicted RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 RNF225M0QZC1 329 aaPredicted RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 SMARCA1P28370 1054 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 MAPK4P31152 587 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 TRIP13Q15645 432 aaPredicted RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 CROCCP2Q86T23 111 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 LXNQ9BS40 222 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 A0A1W2PQJ5 194 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 PDXKO00764 312 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 THAP12O43422 761 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CYP11B2P19099 503 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CHRNA5P30532 468 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 ZRSR2Q15696 482 aaKnown RBP13.9□□□□□ -0.18
MSH6-215ENST00000622629 GNPTABQ3T906 1256 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 FBF1Q8TES7 1133 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 BAIAP2L1Q9UHR4 511 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
MSH6-215ENST00000622629 SLC16A4O15374 487 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 TMEM139Q8IV31 216 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 INTS9Q9NV88 658 aaKnown RBP13.89□□□□□ -0.19
MSH6-215ENST00000622629 ATRNO75882 1429 aa13.89□□□□□ -0.19
MSH6-215ENST00000622629 TRIM66O15016 1216 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms