RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 PAIP2BQ9ULR5 123 aaKnown RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 SOWAHDA6NJG2 315 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 F5H6K3 240 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
COL25A1-209ENST00000622134 CACNB3P54284 484 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 KLRC3Q07444 240 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 Q3C1V9 767 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 MAP7D1Q3KQU3 841 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 TTC39CQ8N584 583 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 STOML1Q9UBI4 398 aa11.28□□□□□ -0.6
COL25A1-209ENST00000622134 PRKAB2O43741 272 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 ORC4O43929 436 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 TMED1Q13445 227 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 SLC39A14Q15043 492 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 MTERF2Q49AM1 385 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.6
COL25A1-209ENST00000622134 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.6
COL25A1-209ENST00000622134 PFASO15067 1338 aa11.27□□□□□ -0.6
COL25A1-209ENST00000622134 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 MANSC4A6NHS7 340 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PSMD14O00487 310 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PSMC4P43686 418 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PTH1RQ03431 593 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GABPAQ06546 454 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 MTMR1Q13613 665 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 E4F1Q66K89 784 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 C1orf228Q6PIY5 440 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 SDCCAG8Q86SQ7 713 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 TBCKQ8TEA7 893 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GFM2Q969S9 779 aaKnown RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 FGD4Q96M96 766 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 NUF2Q9BZD4 464 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 RPAP3Q9H6T3 665 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 RIC8AQ9NPQ8 531 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 CHCHD3Q9NX63 227 aaKnown RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 ENO4A6NNW6 628 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 RNF8O76064 485 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 CHGBP05060 677 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GYS1P13807 737 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PSMD7P51665 324 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 CYP4A11Q02928 519 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PPARDQ03181 441 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GOLGA8FQ08AF8 430 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GOLGA8DPQ0D2H9 430 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 KLHL30Q0D2K2 578 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 CHST13Q8NET6 341 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 GCOM2Q9BZD3 368 aaPredicted RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 PUS7LQ9H0K6 701 aaKnown RBP11.27□□□□□ -0.61
COL25A1-209ENST00000622134 EPN3Q9H201 632 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 TBC1D7Q9P0N9 293 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
COL25A1-209ENST00000622134 KCNK3O14649 394 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 SRGAP2BP0DMP2 458 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 IL9RQ01113 521 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 CUL1Q13616 776 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 TRIM50Q86XT4 487 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 CFAP61Q8NHU2 1237 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 ZNF512BQ96KM6 892 aaPredicted RBP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 RPF1Q9H9Y2 349 aaKnown RBP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 RAVER2Q9HCJ3 691 aaKnown RBP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 I3L4J1 428 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 MED7O43513 233 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 CIITAP33076 1130 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 HMGCS2P54868 508 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 C2orf54Q08AI8 447 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 RESTQ13127 1097 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 PSPC1Q8WXF1 523 aaKnown RBP11.26□□□□□ -0.61
COL25A1-209ENST00000622134 OLFM3Q96PB7 478 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 GSDMAQ96QA5 445 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 DAGLAQ9Y4D2 1042 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 K7ERI5 159 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 BAG2O95816 211 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 RGS2P41220 211 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 PTK2Q05397 1052 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 PTGDRQ13258 359 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 CFAP157Q5JU67 520 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 XRRA1Q6P2D8 792 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 KRT12Q99456 494 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 AMFRQ9UKV5 643 aa11.26□□□□□ -0.61
COL25A1-209ENST00000622134 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms